MTR_1g077360 (Medicago truncatula)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 MTR_1g077360 T254710_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
KEH42867 MADS box 17 64

Links

Other MADS box family TFs
Other Medicago truncatula TFs

256 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_1g075600 Medicago truncatula MTR_1g075600 N 1.000
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.958
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.958
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.938
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.917
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.917
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.917
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.917
Ca_04661 Cicer arietinum Ca_04661 N 0.917
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.896
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.896
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.896
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.896
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.896
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.896
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.896
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.896
Ca_04659 Cicer arietinum Ca_04659 N 0.896
Ca_04660 Cicer arietinum Ca_04660 N 0.896
Ca_04665 Cicer arietinum Ca_04665 N 0.896
Cla006571 Citrullus lanatus Cla006571 N 0.896
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.896
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.896
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.896
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.896
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.896
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.896
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.875
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.875
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.875
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.875
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.875
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.875
Ca_04662 Cicer arietinum Ca_04662 N 0.875
Pm021071 Prunus mume Pm021071 N 0.875
30099.m001672 Ricinus communis 30099.m001672 N 0.875
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.875
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.875
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.875
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.875
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.875
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.875
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.854
AGL62 Arabidopsis thaliana AT5G60440 I 0.854
Bo1g112460 Brassica oleracea Bo1g112460 N 0.854
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.854
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.854
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.854
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.854
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.854
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.854
TCM_006323 Theobroma cacao TCM_006323 N 0.854
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.854
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.854
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.854
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.854
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.854
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.854
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.854
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.854
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.854
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.854
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.854
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.854
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.854
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.854
MDP0000434703 Malus domestica MDP0000434703 I 0.854
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.854
AGL28 Arabidopsis thaliana AT1G01530 N 0.833
Bo5g113750 Brassica oleracea Bo5g113750 N 0.833
Bo9g142570 Brassica oleracea Bo9g142570 N 0.833
Bra002480 Brassica rapa Bra002480 N 0.833
Bra038225 Brassica rapa Bra038225 N 0.833
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.833
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.833
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.833
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.833
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.833
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.833
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.833
Pm021018 Prunus mume Pm021018 N 0.833
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.833
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.833
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.833
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.833
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.833
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.833
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.833
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.833
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.833
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.833
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.833
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.833
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.833
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.833
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.833
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.833
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.833
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.833
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.833
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.833
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.833
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.833
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.833
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.833
MDP0000233925 Malus domestica MDP0000233925 N 0.833
MDP0000278770 Malus domestica MDP0000278770 N 0.833
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.833
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.833
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.816
Bra022434 Brassica rapa Bra022434 N 0.812
MTR_0121s0100 Medicago truncatula MTR_0121s0100 N 0.812
MTR_1g075570 Medicago truncatula MTR_1g075570 N 0.812
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.812
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.812
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.812
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.812
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.812
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.812
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.812
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.812
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.812
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.812
MDP0000221590 Malus domestica MDP0000221590 N 0.812
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.812
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.812
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.795
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.792
AGL23 Arabidopsis thaliana AT1G65360 N 0.792
MTR_0121s0080 Medicago truncatula MTR_0121s0080 N 0.792
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.792
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.792
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.792
Pm021070 Prunus mume Pm021070 N 0.792
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.792
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.792
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.792
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.792
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.792
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.792
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.792
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.792
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.792
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.792
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.792
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.771
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.771
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.771
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.771
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.771
Ca_07607 Cicer arietinum Ca_07607 N 0.771
Ca_26354 Cicer arietinum Ca_26354 N 0.771
29613.m000367 Ricinus communis 29613.m000367 N 0.771
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.771
mgf018529m Mimulus guttatus mgf018529m N 0.771
mgf024307m Mimulus guttatus mgf024307m N 0.771
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.771
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.771
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.771
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.771
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.771
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.771
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.771
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.771
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.771
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.771
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.771
MDP0000168914 Malus domestica MDP0000168914 N 0.771
Thhalv10000432m.g Eutrema salsugineum Thhalv10000432m.g N 0.771
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.771
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.771
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.771
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.771
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.771
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.750
AGL61 Arabidopsis thaliana AT2G24840 N 0.750
Bo2g024910 Brassica oleracea Bo2g024910 N 0.750
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.750
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.750
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.750
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.750
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.750
TCM_040735 Theobroma cacao TCM_040735 N 0.750
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.750
Pm021017 Prunus mume Pm021017 N 0.750
cassava21573.m1 Manihot esculenta cassava21573.m1 N 0.750
mgf022147m Mimulus guttatus mgf022147m N 0.750
mgf022790m Mimulus guttatus mgf022790m N 0.750
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.750
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.750
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.750
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.750
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.750
evm.TU.contig_37489 Carica papaya evm.TU.contig_37489 N 0.750
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.750
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.750
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.750
evm.TU.supercontig_695.8 Carica papaya evm.TU.supercontig_695.8 N 0.750
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.750
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.750
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.750
Bo4g165540 Brassica oleracea Bo4g165540 N 0.729
Bra011938 Brassica rapa Bra011938 N 0.729
Bra020247 Brassica rapa Bra020247 N 0.729
GLYMA10G10610 Glycine max GLYMA10G10610 N 0.729
GLYMA10G10840 Glycine max GLYMA10G10840 N 0.729
GLYMA10G10860 Glycine max GLYMA10G10860 N 0.729
GLYMA10G10930 Glycine max GLYMA10G10930 N 0.729
GLYMA10G11450 Glycine max GLYMA10G11450 N 0.729
GLYMA17G01771 Glycine max GLYMA17G01771 N 0.729
MTR_3g067870 Medicago truncatula MTR_3g067870 N 0.729
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.729
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.729
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.729
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.729
Pm016629 Prunus mume Pm016629 N 0.729
30099.m001671 Ricinus communis 30099.m001671 N 0.729
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.729
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.729
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.729
evm.TU.supercontig_348.1 Carica papaya evm.TU.supercontig_348.1 N 0.729
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.729
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.729
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.729
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.729
chr1.LjB17A22.60.nc Lotus japonicus chr1.LjB17A22.60.nc N 0.729
chr2.CM0250.170.nc Lotus japonicus chr2.CM0250.170.nc N 0.729
LjSGA_020620.1 Lotus japonicus LjSGA_020620.1 N 0.729
Bo4g070340 Brassica oleracea Bo4g070340 N 0.723
evm.TU.contig_41453 Carica papaya evm.TU.contig_41453 N 0.717
Bo8g099550 Brassica oleracea Bo8g099550 N 0.708
Bra007829 Brassica rapa Bra007829 N 0.708
Bra026764 Brassica rapa Bra026764 N 0.708
GLYMA10G10640 Glycine max GLYMA10G10640 N 0.708
GLYMA10G10770 Glycine max GLYMA10G10770 N 0.708
GLYMA10G10900 Glycine max GLYMA10G10900 N 0.708
GLYMA20G27361 Glycine max GLYMA20G27361 N 0.708
MTR_3g067910 Medicago truncatula MTR_3g067910 N 0.708
MTR_4g036915 Medicago truncatula MTR_4g036915 I 0.708
MTR_7g028448 Medicago truncatula MTR_7g028448 I 0.708
PGSC0003DMG400035221 Solanum tuberosum PGSC0003DMG400035221 N 0.708
PGSC0003DMG400040127 Solanum tuberosum PGSC0003DMG400040127 N 0.708
PGSC0003DMG400044513 Solanum tuberosum PGSC0003DMG400044513 N 0.708
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.708
TCM_006325 Theobroma cacao TCM_006325 N 0.708
29838.m001672 Ricinus communis 29838.m001672 N 0.708
mgf022625m Mimulus guttatus mgf022625m N 0.708
evm.TU.contig_37107 Carica papaya evm.TU.contig_37107 N 0.708
Gorai.012G163200 Gossypium raimondii Gorai.012G163200 N 0.708
Gorai.N026300 Gossypium raimondii Gorai.N026300 N 0.708
Thhalv10003315m.g Eutrema salsugineum Thhalv10003315m.g N 0.708
chr1.LjB17A22.10.nc Lotus japonicus chr1.LjB17A22.10.nc N 0.708
LjSGA_025689.1.1 Lotus japonicus LjSGA_025689.1.1 N 0.708
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N 0.708
LjSGA_074894.2 Lotus japonicus LjSGA_074894.2 N 0.708
LjT01D09.100.nd Lotus japonicus LjT01D09.100.nd N 0.708