Thhalv10003315m.g (Eutrema salsugineum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Thhalv10003315m.g T259105_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10003315m MADS box 3 50

Links

Other MADS box family TFs
Other Eutrema salsugineum TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.833
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.792
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.792
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.792
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.771
30099.m001672 Ricinus communis 30099.m001672 N 0.771
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.771
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.771
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.771
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.771
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.771
AGL62 Arabidopsis thaliana AT5G60440 I 0.750
Bo1g112460 Brassica oleracea Bo1g112460 N 0.750
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.750
TCM_006323 Theobroma cacao TCM_006323 N 0.750
Cla006571 Citrullus lanatus Cla006571 N 0.750
Pm021071 Prunus mume Pm021071 N 0.750
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.750
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.750
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.750
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.750
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.750
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.750
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.750
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.750
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.750
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.750
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.750
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.750
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.750
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.750
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.750
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.750
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.750
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.750
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.750
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.750
Bra038225 Brassica rapa Bra038225 N 0.729
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.729
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.729
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.729
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.729
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.729
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.729
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.729
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.729
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.729
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.729
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.729
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.729
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.729
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.729
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.729
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.729
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.729
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.729
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.729
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.729
MDP0000434703 Malus domestica MDP0000434703 I 0.729
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.729
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.711
AGL28 Arabidopsis thaliana AT1G01530 N 0.708
Bo5g113750 Brassica oleracea Bo5g113750 N 0.708
Bra002480 Brassica rapa Bra002480 N 0.708
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.708
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.708
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.708
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.708
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.708
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.708
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.708
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.708
Pm021018 Prunus mume Pm021018 N 0.708
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.708
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.708
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.708
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.708
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.708
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.708
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.708
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.708
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.708
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.708
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.708
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.708
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.708
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.708
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.708
MDP0000233925 Malus domestica MDP0000233925 N 0.708
MDP0000278770 Malus domestica MDP0000278770 N 0.708
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.708