Pm021018 (Prunus mume)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pm021018 T257071_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm021018 MADS box 15 62

Links

Other MADS box family TFs
Other Prunus mume TFs

257 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 1.000
Cla006571 Citrullus lanatus Cla006571 N 0.917
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.917
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.917
TCM_006323 Theobroma cacao TCM_006323 N 0.896
30099.m001672 Ricinus communis 30099.m001672 N 0.896
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.896
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.896
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.896
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.875
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.875
Pm021071 Prunus mume Pm021071 N 0.875
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.875
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.875
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.875
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.875
AGL62 Arabidopsis thaliana AT5G60440 I 0.854
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.854
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.854
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.854
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.854
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.854
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.854
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.854
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.854
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.854
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.854
MDP0000434703 Malus domestica MDP0000434703 I 0.854
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.854
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.854
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.833
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.833
Bo1g112460 Brassica oleracea Bo1g112460 N 0.833
Bo5g113750 Brassica oleracea Bo5g113750 N 0.833
Bra002480 Brassica rapa Bra002480 N 0.833
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.833
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.833
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.833
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.833
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.833
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.833
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.833
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.833
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.833
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.833
Ca_04659 Cicer arietinum Ca_04659 N 0.833
Ca_04660 Cicer arietinum Ca_04660 N 0.833
Ca_04665 Cicer arietinum Ca_04665 N 0.833
mgf018529m Mimulus guttatus mgf018529m N 0.833
mgf024307m Mimulus guttatus mgf024307m N 0.833
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.833
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.833
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.833
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.833
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.833
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.833
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.833
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.833
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.833
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.833
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.833
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.833
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.833
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.833
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.833
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.833
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.833
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.833
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.833
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.833
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.833
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.833
MDP0000233925 Malus domestica MDP0000233925 N 0.833
MDP0000278770 Malus domestica MDP0000278770 N 0.833
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.833
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.833
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.816
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.812
Bo4g165540 Brassica oleracea Bo4g165540 N 0.812
Bo9g142570 Brassica oleracea Bo9g142570 N 0.812
Bra022434 Brassica rapa Bra022434 N 0.812
Bra038225 Brassica rapa Bra038225 N 0.812
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.812
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.812
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.812
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.812
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.812
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.812
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.812
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.812
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.812
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.812
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.812
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.812
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.812
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.812
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.812
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.812
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.812
Pm021070 Prunus mume Pm021070 N 0.812
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.812
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.812
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.812
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.812
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.812
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.812
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.812
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.812
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.812
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.812
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.812
MDP0000221590 Malus domestica MDP0000221590 N 0.812
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.812
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.812
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.812
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.812
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.812
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.792
AGL28 Arabidopsis thaliana AT1G01530 N 0.792
AGL61 Arabidopsis thaliana AT2G24840 N 0.792
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.792
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.792
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.792
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.792
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.792
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.792
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.792
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.792
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.792
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.792
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.792
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.792
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.792
Ca_04661 Cicer arietinum Ca_04661 N 0.792
Ca_07607 Cicer arietinum Ca_07607 N 0.792
Ca_26354 Cicer arietinum Ca_26354 N 0.792
Pm021017 Prunus mume Pm021017 N 0.792
29613.m000367 Ricinus communis 29613.m000367 N 0.792
mgf022147m Mimulus guttatus mgf022147m N 0.792
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.792
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.792
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.792
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.792
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.792
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.792
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.792
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.792
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.792
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.792
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.792
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.792
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.792
Bra035685 Brassica rapa Bra035685 N 0.787
POPTR_0007s03410 Populus trichocarpa POPTR_0007s03410 N 0.786
Bra026764 Brassica rapa Bra026764 N 0.771
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.771
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.771
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.771
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.771
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.771
Ca_04662 Cicer arietinum Ca_04662 N 0.771
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.771
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.771
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.771
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.771
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.771
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.771
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.771
MDP0000168914 Malus domestica MDP0000168914 N 0.771
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.771
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.771
Bo8g099550 Brassica oleracea Bo8g099550 N 0.750
Bra007829 Brassica rapa Bra007829 N 0.750
Bra011938 Brassica rapa Bra011938 N 0.750
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.750
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.750
TCM_006325 Theobroma cacao TCM_006325 N 0.750
Cla010744 Citrullus lanatus Cla010744 N 0.750
30099.m001671 Ricinus communis 30099.m001671 N 0.750
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.750
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.750
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.750
mgf022625m Mimulus guttatus mgf022625m N 0.750
evm.TU.contig_33091.2 Carica papaya evm.TU.contig_33091.2 N 0.750
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.750
evm.TU.contig_46312 Carica papaya evm.TU.contig_46312 N 0.750
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.750
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.750
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.750
Gorai.012G163200 Gossypium raimondii Gorai.012G163200 N 0.750
Gorai.N026300 Gossypium raimondii Gorai.N026300 N 0.750
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.750
Lus10031073.g Linum usitatissimum Lus10031073.g N 0.750
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.750
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.750
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.750
Bo4g070340 Brassica oleracea Bo4g070340 N 0.745
MTR_1g075570 Medicago truncatula MTR_1g075570 N 0.733
AGL23 Arabidopsis thaliana AT1G65360 N 0.729
Bra032057 Brassica rapa Bra032057 N 0.729
GLYMA17G01771 Glycine max GLYMA17G01771 N 0.729
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.729
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.729
PGSC0003DMG400040127 Solanum tuberosum PGSC0003DMG400040127 N 0.729
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.729
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.729
POPTR_0017s06710 Populus trichocarpa POPTR_0017s06710 N 0.729
POPTR_0017s06800 Populus trichocarpa POPTR_0017s06800 N 0.729
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.729
TCM_006324 Theobroma cacao TCM_006324 N 0.729
TCM_040735 Theobroma cacao TCM_040735 N 0.729
Ca_04658 Cicer arietinum Ca_04658 N 0.729
Pm016629 Prunus mume Pm016629 N 0.729
Cucsa.342610 Cucumis sativus Cucsa.342610 N 0.729
mgf022790m Mimulus guttatus mgf022790m N 0.729
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.729
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.729
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.729
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.729
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.729
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.729
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.729
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.729
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.729
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.729
Lus10035456.g Linum usitatissimum Lus10035456.g N 0.729
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N 0.729
LjT01D09.100.nd Lotus japonicus LjT01D09.100.nd N 0.729
evm.TU.contig_41453 Carica papaya evm.TU.contig_41453 N 0.717
Bo4g157220 Brassica oleracea Bo4g157220 N 0.708
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.708
MTR_4g127140 Medicago truncatula MTR_4g127140 N 0.708
PGSC0003DMG400035221 Solanum tuberosum PGSC0003DMG400035221 N 0.708
PGSC0003DMG400045239 Solanum tuberosum PGSC0003DMG400045239 N 0.708
POPTR_0004s00400 Populus trichocarpa POPTR_0004s00400 N 0.708
POPTR_0017s06810 Populus trichocarpa POPTR_0017s06810 N 0.708
VIT_10s0003g03970 Vitis vinifera VIT_10s0003g03970 N 0.708
27866.m000233 Ricinus communis 27866.m000233 N 0.708
29838.m001672 Ricinus communis 29838.m001672 N 0.708
cassava21573.m1 Manihot esculenta cassava21573.m1 N 0.708
mgf024454m Mimulus guttatus mgf024454m N 0.708
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.708
Ciclev10030387m.g Citrus clementina Ciclev10030387m.g N 0.708
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.708
evm.TU.supercontig_20.85 Carica papaya evm.TU.supercontig_20.85 N 0.708
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.708
gene00615-v1.0-hybrid Fragaria vesca gene00615-v1.0-hybrid N 0.708
gene07364-v1.0-hybrid Fragaria vesca gene07364-v1.0-hybrid N 0.708
MDP0000274606 Malus domestica MDP0000274606 N 0.708
orange1.1g036705m.g Citrus sinensis orange1.1g036705m.g N 0.708
Thhalv10000432m.g Eutrema salsugineum Thhalv10000432m.g N 0.708
Thhalv10003315m.g Eutrema salsugineum Thhalv10003315m.g N 0.708
LjSGA_082681.2 Lotus japonicus LjSGA_082681.2 N 0.708
LjSGA_120826.2 Lotus japonicus LjSGA_120826.2 N 0.708
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.705
evm.TU.contig_27553.5 Carica papaya evm.TU.contig_27553.5 N 0.702
evm.TU.contig_47064.2 Carica papaya evm.TU.contig_47064.2 N 0.702