MTR_3g080940 (Medicago truncatula)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 MTR_3g080940 T254752_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AES71710 MADS box 17 64

Links

Other MADS box family TFs
Other Medicago truncatula TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.979
Ca_07607 Cicer arietinum Ca_07607 N 0.979
Ca_26354 Cicer arietinum Ca_26354 N 0.979
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.979
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.958
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.938
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.938
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.917
29613.m000367 Ricinus communis 29613.m000367 N 0.917
30099.m001671 Ricinus communis 30099.m001671 N 0.917
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.917
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.896
Pm021070 Prunus mume Pm021070 N 0.896
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.896
MDP0000168914 Malus domestica MDP0000168914 N 0.896
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.875
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.875
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.875
Pm016629 Prunus mume Pm016629 N 0.875
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.875
mgf018529m Mimulus guttatus mgf018529m N 0.875
mgf024307m Mimulus guttatus mgf024307m N 0.875
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.875
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.854
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.854
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.854
Ciclev10030387m.g Citrus clementina Ciclev10030387m.g N 0.854
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.854
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.854
orange1.1g036705m.g Citrus sinensis orange1.1g036705m.g N 0.854
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.833
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.833
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.833
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.833
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.833
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.833
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.833
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.833
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.833
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.833
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.833
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.833
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.833
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.812
AGL61 Arabidopsis thaliana AT2G24840 N 0.812
Bra026764 Brassica rapa Bra026764 N 0.812
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.812
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.812
TCM_040735 Theobroma cacao TCM_040735 N 0.812
Cla006571 Citrullus lanatus Cla006571 N 0.812
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.812
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.812
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.812
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.812
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.812
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.812
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.812
AGL62 Arabidopsis thaliana AT5G60440 I 0.792
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.792
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.792
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.792
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.792
Pm021018 Prunus mume Pm021018 N 0.792
30099.m001672 Ricinus communis 30099.m001672 N 0.792
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.792
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.792
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.792
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.792
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.792
Bo4g165540 Brassica oleracea Bo4g165540 N 0.771
Bo8g099550 Brassica oleracea Bo8g099550 N 0.771
Bra007829 Brassica rapa Bra007829 N 0.771
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.771
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.771
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.771
TCM_006323 Theobroma cacao TCM_006323 N 0.771
TCM_006324 Theobroma cacao TCM_006324 N 0.771
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.771
Ca_04665 Cicer arietinum Ca_04665 N 0.771
Pm021071 Prunus mume Pm021071 N 0.771
mgf021403m Mimulus guttatus mgf021403m N 0.771
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.771
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.771
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.771
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.771
SapurV1A.1128s0080 Salix purpurea SapurV1A.1128s0080 N 0.771
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.771
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.771
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.771
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.771
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.771
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.763
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.750
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.750
AGL28 Arabidopsis thaliana AT1G01530 N 0.750
Bra002480 Brassica rapa Bra002480 N 0.750
Bra032057 Brassica rapa Bra032057 N 0.750
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.750
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.750
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.750
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.750
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.750
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.750
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.750
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.750
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.750
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.750
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.750
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.750
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.750
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.750
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.750
Ca_04662 Cicer arietinum Ca_04662 N 0.750
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.750
mgf020533m Mimulus guttatus mgf020533m N 0.750
mgf022403m Mimulus guttatus mgf022403m N 0.750
mgf023207m Mimulus guttatus mgf023207m N 0.750
mgf024490m Mimulus guttatus mgf024490m N 0.750
mgf025566m Mimulus guttatus mgf025566m N 0.750
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.750
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.750
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.750
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.750
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.750
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.750
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.750
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.750
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.750
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.750
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.750
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.750
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.750
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.750
MDP0000221590 Malus domestica MDP0000221590 N 0.750
MDP0000434703 Malus domestica MDP0000434703 I 0.750
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.750
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.750
Bra035685 Brassica rapa Bra035685 N 0.745
PGSC0003DMG400036006 Solanum tuberosum PGSC0003DMG400036006 N 0.745
TCM_000878 Theobroma cacao TCM_000878 N 0.745
Bo1g112460 Brassica oleracea Bo1g112460 N 0.729
Bo4g157220 Brassica oleracea Bo4g157220 N 0.729
Bo9g142570 Brassica oleracea Bo9g142570 N 0.729
Bra022434 Brassica rapa Bra022434 N 0.729
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.729
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.729
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.729
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.729
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.729
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.729
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.729
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.729
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.729
Ca_04659 Cicer arietinum Ca_04659 N 0.729
Ca_04660 Cicer arietinum Ca_04660 N 0.729
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.729
mgf017842m Mimulus guttatus mgf017842m N 0.729
mgf018184m Mimulus guttatus mgf018184m N 0.729
mgf020939m Mimulus guttatus mgf020939m N 0.729
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.729
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.729
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.729
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.729
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.729
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.729
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.729
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.729
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.729
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.729
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.729
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.729
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.729
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.729
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.729
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.729
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.729
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.729
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.729
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.729
MDP0000233925 Malus domestica MDP0000233925 N 0.729
MDP0000278770 Malus domestica MDP0000278770 N 0.729
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.729
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.729
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.729
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.729
AGL23 Arabidopsis thaliana AT1G65360 N 0.708
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.708
Bo5g113750 Brassica oleracea Bo5g113750 N 0.708
Bra038225 Brassica rapa Bra038225 N 0.708
BRADI1G27900 Brachypodium distachyon BRADI1G27900 N 0.708
F775_04223 Aegilops tauschii F775_04223 I 0.708
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.708
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.708
GLYMA20G27361 Glycine max GLYMA20G27361 N 0.708
MTR_0121s0080 Medicago truncatula MTR_0121s0080 N 0.708
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.708
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.708
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.708
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.708
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.708
PGSC0003DMG400045239 Solanum tuberosum PGSC0003DMG400045239 N 0.708
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.708
VIT_07s0005g06590 Vitis vinifera VIT_07s0005g06590 N 0.708
VIT_10s0003g03970 Vitis vinifera VIT_10s0003g03970 N 0.708
Ca_04658 Cicer arietinum Ca_04658 N 0.708
Ca_04661 Cicer arietinum Ca_04661 N 0.708
Ca_18845 Cicer arietinum Ca_18845 N 0.708
Ca_24185 Cicer arietinum Ca_24185 I 0.708
29838.m001672 Ricinus communis 29838.m001672 N 0.708
cassava21573.m1 Manihot esculenta cassava21573.m1 N 0.708
mgf022147m Mimulus guttatus mgf022147m N 0.708
mgf022790m Mimulus guttatus mgf022790m N 0.708
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.708
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.708
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.708
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.708
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.708
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.708
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.708
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.708
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.708
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.708
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.708
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.708
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.708
Lus10031073.g Linum usitatissimum Lus10031073.g N 0.708
Thhalv10028255m.g Eutrema salsugineum Thhalv10028255m.g N 0.708
LjSGA_100222.1 Lotus japonicus LjSGA_100222.1 N 0.708