MTR_1g108500 (Medicago truncatula)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 MTR_1g108500 T254721_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AES62808 MADS box 109 152

Links

Other MADS box family TFs
Other Medicago truncatula TFs

145 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.864
MTR_0121s0080 Medicago truncatula MTR_0121s0080 N 0.864
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.864
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.864
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.864
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.864
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.864
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.841
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.841
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.841
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.841
Ca_04665 Cicer arietinum Ca_04665 N 0.841
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.818
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.818
Ca_04662 Cicer arietinum Ca_04662 N 0.818
AGL62 Arabidopsis thaliana AT5G60440 I 0.795
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.795
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.795
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.795
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.795
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.795
MTR_7g062350 Medicago truncatula MTR_7g062350 N 0.795
TCM_040735 Theobroma cacao TCM_040735 N 0.795
Ca_04659 Cicer arietinum Ca_04659 N 0.795
Ca_04660 Cicer arietinum Ca_04660 N 0.795
Ca_04661 Cicer arietinum Ca_04661 N 0.795
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.795
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.795
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.789
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.773
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.773
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.773
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.773
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.773
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.773
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.773
Pm021071 Prunus mume Pm021071 N 0.773
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.773
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.773
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.773
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.773
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.771
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.771
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.771
Bo9g142570 Brassica oleracea Bo9g142570 N 0.750
Bra002480 Brassica rapa Bra002480 N 0.750
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.750
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.750
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.750
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.750
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.750
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.750
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.750
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.750
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.750
Ca_07607 Cicer arietinum Ca_07607 N 0.750
Ca_26354 Cicer arietinum Ca_26354 N 0.750
Cla006571 Citrullus lanatus Cla006571 N 0.750
Pm021070 Prunus mume Pm021070 N 0.750
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.750
mgf018529m Mimulus guttatus mgf018529m N 0.750
mgf024307m Mimulus guttatus mgf024307m N 0.750
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.750
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.750
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.750
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.750
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.750
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.750
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.750
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.750
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.750
MDP0000168914 Malus domestica MDP0000168914 N 0.750
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.750
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.750
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.729
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.729
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.729
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.729
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.727
Bo1g112460 Brassica oleracea Bo1g112460 N 0.727
Bra011938 Brassica rapa Bra011938 N 0.727
Bra022434 Brassica rapa Bra022434 N 0.727
Bra038225 Brassica rapa Bra038225 N 0.727
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.727
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.727
TCM_006323 Theobroma cacao TCM_006323 N 0.727
TCM_006324 Theobroma cacao TCM_006324 N 0.727
Pm016629 Prunus mume Pm016629 N 0.727
30099.m001672 Ricinus communis 30099.m001672 N 0.727
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.727
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.727
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.727
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.727
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.727
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.727
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.727
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.727
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.727
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.727
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.727
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.727
MDP0000233925 Malus domestica MDP0000233925 N 0.727
MDP0000278770 Malus domestica MDP0000278770 N 0.727
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.727
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.727
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.727
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.727
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.727
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.727
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.727
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.727
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.708
MTR_0121s0100 Medicago truncatula MTR_0121s0100 N 0.708
AGL28 Arabidopsis thaliana AT1G01530 N 0.705
AGL23 Arabidopsis thaliana AT1G65360 N 0.705
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.705
Bo5g113750 Brassica oleracea Bo5g113750 N 0.705
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.705
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.705
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.705
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.705
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.705
Ca_04658 Cicer arietinum Ca_04658 N 0.705
Ca_18845 Cicer arietinum Ca_18845 N 0.705
Pm021018 Prunus mume Pm021018 N 0.705
29613.m000367 Ricinus communis 29613.m000367 N 0.705
30099.m001671 Ricinus communis 30099.m001671 N 0.705
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.705
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.705
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.705
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.705
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.705
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.705
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.705
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.705
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.705
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.705
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.705
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.705
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.705
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.705
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.705
chr2.CM0250.170.nc Lotus japonicus chr2.CM0250.170.nc N 0.705
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.705
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.705