MTR_1g108510 (Medicago truncatula)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 MTR_1g108510 T254722_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AES62809 MADS box 17 64

Links

Other MADS box family TFs
Other Medicago truncatula TFs

244 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_3g030770 Medicago truncatula MTR_3g030770 N 1.000
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.958
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.938
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.938
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.938
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.938
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.938
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.917
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.917
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.917
Ca_04665 Cicer arietinum Ca_04665 N 0.917
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.896
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.896
MTR_0121s0100 Medicago truncatula MTR_0121s0100 N 0.896
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.896
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.896
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.896
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.896
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.896
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.896
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.896
Ca_04662 Cicer arietinum Ca_04662 N 0.896
AGL62 Arabidopsis thaliana AT5G60440 I 0.875
Bo9g142570 Brassica oleracea Bo9g142570 N 0.875
Bra002480 Brassica rapa Bra002480 N 0.875
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.875
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.875
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.875
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.875
Ca_04659 Cicer arietinum Ca_04659 N 0.875
Ca_04660 Cicer arietinum Ca_04660 N 0.875
Ca_04661 Cicer arietinum Ca_04661 N 0.875
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.875
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.854
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.854
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.854
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.854
Cla006571 Citrullus lanatus Cla006571 N 0.854
Pm021071 Prunus mume Pm021071 N 0.854
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.854
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.854
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.854
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.854
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.854
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.854
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.854
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.854
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.854
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.833
MTR_0121s0080 Medicago truncatula MTR_0121s0080 N 0.833
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.833
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.833
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.833
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.833
30099.m001672 Ricinus communis 30099.m001672 N 0.833
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.833
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.833
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.833
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.833
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.833
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.833
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.833
MDP0000434703 Malus domestica MDP0000434703 I 0.833
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.833
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.833
AGL28 Arabidopsis thaliana AT1G01530 N 0.812
Bo1g112460 Brassica oleracea Bo1g112460 N 0.812
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.812
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.812
TCM_006323 Theobroma cacao TCM_006323 N 0.812
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.812
mgf022790m Mimulus guttatus mgf022790m N 0.812
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.812
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.812
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.812
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.812
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.812
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.812
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.812
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.812
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.812
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.812
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.812
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.812
MDP0000233925 Malus domestica MDP0000233925 N 0.812
MDP0000278770 Malus domestica MDP0000278770 N 0.812
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.812
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.812
Bo5g113750 Brassica oleracea Bo5g113750 N 0.792
Bra038225 Brassica rapa Bra038225 N 0.792
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.792
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.792
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.792
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.792
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.792
Pm021018 Prunus mume Pm021018 N 0.792
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.792
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.792
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.792
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.792
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.792
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.792
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.792
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.792
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.792
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.792
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.792
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.792
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.792
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.792
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.792
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.792
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.792
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.792
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.792
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.792
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.792
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.792
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.792
MDP0000221590 Malus domestica MDP0000221590 N 0.792
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.792
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.792
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.792
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.771
AGL23 Arabidopsis thaliana AT1G65360 N 0.771
Bra022434 Brassica rapa Bra022434 N 0.771
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.771
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.771
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.771
TCM_040735 Theobroma cacao TCM_040735 N 0.771
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.771
mgf022147m Mimulus guttatus mgf022147m N 0.771
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.771
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.771
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.771
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.771
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.771
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.771
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.771
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.771
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.771
Bo2g024910 Brassica oleracea Bo2g024910 N 0.750
Bra020247 Brassica rapa Bra020247 N 0.750
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.750
MTR_1g075570 Medicago truncatula MTR_1g075570 N 0.750
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.750
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.750
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.750
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.750
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.750
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.750
Ca_07607 Cicer arietinum Ca_07607 N 0.750
Ca_26354 Cicer arietinum Ca_26354 N 0.750
Pm021070 Prunus mume Pm021070 N 0.750
29613.m000367 Ricinus communis 29613.m000367 N 0.750
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.750
mgf018529m Mimulus guttatus mgf018529m N 0.750
mgf024307m Mimulus guttatus mgf024307m N 0.750
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.750
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.750
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.750
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.750
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.750
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.750
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.750
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.750
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.750
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.750
Thhalv10000432m.g Eutrema salsugineum Thhalv10000432m.g N 0.750
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.750
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.750
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.750
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.750
BRADI1G27900 Brachypodium distachyon BRADI1G27900 N 0.729
GLYMA10G10610 Glycine max GLYMA10G10610 N 0.729
GLYMA10G10840 Glycine max GLYMA10G10840 N 0.729
GLYMA10G10860 Glycine max GLYMA10G10860 N 0.729
GLYMA10G10930 Glycine max GLYMA10G10930 N 0.729
GLYMA10G11450 Glycine max GLYMA10G11450 N 0.729
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.729
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.729
PGSC0003DMG400044513 Solanum tuberosum PGSC0003DMG400044513 N 0.729
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.729
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.729
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.729
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.729
Pm016629 Prunus mume Pm016629 N 0.729
Pm021017 Prunus mume Pm021017 N 0.729
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.729
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.729
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.729
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.729
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.729
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.729
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.729
evm.TU.supercontig_695.8 Carica papaya evm.TU.supercontig_695.8 N 0.729
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.729
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.729
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.729
MDP0000168914 Malus domestica MDP0000168914 N 0.729
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.729
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.729
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.729
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.729
chr2.CM0250.170.nc Lotus japonicus chr2.CM0250.170.nc N 0.729
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.729
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.708
AGL61 Arabidopsis thaliana AT2G24840 N 0.708
Bo4g165540 Brassica oleracea Bo4g165540 N 0.708
Bra011938 Brassica rapa Bra011938 N 0.708
GLYMA10G10640 Glycine max GLYMA10G10640 N 0.708
GLYMA10G10770 Glycine max GLYMA10G10770 N 0.708
GLYMA10G10900 Glycine max GLYMA10G10900 N 0.708
MTR_4g036915 Medicago truncatula MTR_4g036915 I 0.708
MTR_7g028448 Medicago truncatula MTR_7g028448 I 0.708
PGSC0003DMG400035221 Solanum tuberosum PGSC0003DMG400035221 N 0.708
PGSC0003DMG400039835 Solanum tuberosum PGSC0003DMG400039835 N 0.708
PGSC0003DMG400040127 Solanum tuberosum PGSC0003DMG400040127 N 0.708
PGSC0003DMG400046733 Solanum tuberosum PGSC0003DMG400046733 N 0.708
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.708
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.708
Solyc01g060310.1 Solanum lycopersicum Solyc01g060310.1 N 0.708
Solyc04g025050.1 Solanum lycopersicum Solyc04g025050.1 N 0.708
30099.m001671 Ricinus communis 30099.m001671 N 0.708
cassava21573.m1 Manihot esculenta cassava21573.m1 N 0.708
Aquca_015_00242 Aquilegia coerulea Aquca_015_00242 N 0.708
Aquca_015_00243 Aquilegia coerulea Aquca_015_00243 N 0.708
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.708
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.708
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.708
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.708
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.708
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.708
evm.TU.supercontig_348.1 Carica papaya evm.TU.supercontig_348.1 N 0.708
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.708
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.708
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.708
Lus10031073.g Linum usitatissimum Lus10031073.g N 0.708
Lus10035456.g Linum usitatissimum Lus10035456.g N 0.708
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.708
Thhalv10028255m.g Eutrema salsugineum Thhalv10028255m.g N 0.708
chr1.LjB17A22.60.nc Lotus japonicus chr1.LjB17A22.60.nc N 0.708
LjSGA_020620.1 Lotus japonicus LjSGA_020620.1 N 0.708
Bo4g070340 Brassica oleracea Bo4g070340 N 0.702