PGSC0003DMG400046733 (Solanum tuberosum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PGSC0003DMG400046733 T255742_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400097162 MADS box 15 61

Links

Other MADS box family TFs
Other Solanum tuberosum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400039835 Solanum tuberosum PGSC0003DMG400039835 N 0.938
PGSC0003DMG400036190 Solanum tuberosum PGSC0003DMG400036190 N 0.915
PGSC0003DMG400047285 Solanum tuberosum PGSC0003DMG400047285 N 0.851
PGSC0003DMG400006290 Solanum tuberosum PGSC0003DMG400006290 N 0.766
PGSC0003DMG400046706 Solanum tuberosum PGSC0003DMG400046706 N 0.766
Solyc01g060310.1 Solanum lycopersicum Solyc01g060310.1 N 0.745
Bo9g142570 Brassica oleracea Bo9g142570 N 0.729
Bra002480 Brassica rapa Bra002480 N 0.723
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.723
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.723
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.723
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.723
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.723
PGSC0003DMG400038207 Solanum tuberosum PGSC0003DMG400038207 I 0.723
Solyc01g060300.1 Solanum lycopersicum Solyc01g060300.1 N 0.723
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.708
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.708
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.708
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.708
Lus10035456.g Linum usitatissimum Lus10035456.g N 0.708
GLYMA10G10640 Glycine max GLYMA10G10640 N 0.702
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.702
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.702
PGSC0003DMG400043978 Solanum tuberosum PGSC0003DMG400043978 N 0.702
Ca_04659 Cicer arietinum Ca_04659 N 0.702
Ca_04660 Cicer arietinum Ca_04660 N 0.702
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.702