MTR_1g105920 (Medicago truncatula)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 MTR_1g105920 T254719_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
KEH43980 MADS box 17 64

Links

Other MADS box family TFs
Other Medicago truncatula TFs

262 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA20G27330 Glycine max GLYMA20G27330 N 1.000
MTR_1g105910 Medicago truncatula MTR_1g105910 N 1.000
MTR_3g052870 Medicago truncatula MTR_3g052870 N 1.000
MTR_8g043650 Medicago truncatula MTR_8g043650 N 1.000
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.979
Ca_04665 Cicer arietinum Ca_04665 N 0.979
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.958
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.958
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.958
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.938
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.938
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.938
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.938
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.938
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.938
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.938
Ca_04659 Cicer arietinum Ca_04659 N 0.938
Ca_04660 Cicer arietinum Ca_04660 N 0.938
Ca_04662 Cicer arietinum Ca_04662 N 0.938
AGL62 Arabidopsis thaliana AT5G60440 I 0.917
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.917
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.896
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.896
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.896
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.896
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.896
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.896
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.896
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.896
Pm021071 Prunus mume Pm021071 N 0.896
Bo9g142570 Brassica oleracea Bo9g142570 N 0.875
Bra002480 Brassica rapa Bra002480 N 0.875
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.875
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.875
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.875
Ca_04661 Cicer arietinum Ca_04661 N 0.875
Cla006571 Citrullus lanatus Cla006571 N 0.875
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.875
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.875
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.875
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.875
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.875
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.875
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.875
MDP0000434703 Malus domestica MDP0000434703 I 0.875
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.875
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.875
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.875
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.864
MTR_0121s0080 Medicago truncatula MTR_0121s0080 N 0.854
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.854
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.854
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.854
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.854
30099.m001672 Ricinus communis 30099.m001672 N 0.854
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.854
MDP0000233925 Malus domestica MDP0000233925 N 0.854
MDP0000278770 Malus domestica MDP0000278770 N 0.854
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.854
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.854
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.833
Bo1g112460 Brassica oleracea Bo1g112460 N 0.833
MTR_0121s0100 Medicago truncatula MTR_0121s0100 N 0.833
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.833
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.833
TCM_006323 Theobroma cacao TCM_006323 N 0.833
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.833
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.833
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.833
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.833
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.833
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.833
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.833
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.833
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.833
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.833
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.833
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.833
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.833
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.833
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.812
Bo5g113750 Brassica oleracea Bo5g113750 N 0.812
Bra038225 Brassica rapa Bra038225 N 0.812
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.812
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.812
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.812
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.812
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.812
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.812
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.812
Pm021018 Prunus mume Pm021018 N 0.812
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.812
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.812
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.812
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.812
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.812
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.812
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.812
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.812
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.812
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.812
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.812
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.812
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.812
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.812
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.812
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.812
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.812
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.812
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.812
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.812
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.812
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.812
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.812
MDP0000221590 Malus domestica MDP0000221590 N 0.812
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.812
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.812
MTR_1g075570 Medicago truncatula MTR_1g075570 N 0.800
Bra022434 Brassica rapa Bra022434 N 0.792
mgf022790m Mimulus guttatus mgf022790m N 0.792
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.792
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.792
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.792
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.792
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.792
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.792
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.792
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.792
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.789
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.771
AGL28 Arabidopsis thaliana AT1G01530 N 0.771
GLYMA10G10840 Glycine max GLYMA10G10840 N 0.771
GLYMA10G10860 Glycine max GLYMA10G10860 N 0.771
GLYMA10G10930 Glycine max GLYMA10G10930 N 0.771
TCM_040735 Theobroma cacao TCM_040735 N 0.771
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.771
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.771
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.771
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.771
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.771
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.771
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.771
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.771
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.771
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.771
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.771
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.771
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.771
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.771
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.771
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.771
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.771
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.771
AGL23 Arabidopsis thaliana AT1G65360 N 0.750
GLYMA10G10640 Glycine max GLYMA10G10640 N 0.750
GLYMA10G10770 Glycine max GLYMA10G10770 N 0.750
GLYMA10G10900 Glycine max GLYMA10G10900 N 0.750
GLYMA10G11450 Glycine max GLYMA10G11450 N 0.750
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.750
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.750
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.750
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.750
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.750
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.750
Ca_07607 Cicer arietinum Ca_07607 N 0.750
Ca_26354 Cicer arietinum Ca_26354 N 0.750
Pm021017 Prunus mume Pm021017 N 0.750
Pm021070 Prunus mume Pm021070 N 0.750
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.750
mgf022147m Mimulus guttatus mgf022147m N 0.750
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.750
evm.TU.contig_37489 Carica papaya evm.TU.contig_37489 N 0.750
evm.TU.contig_46312 Carica papaya evm.TU.contig_46312 N 0.750
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.750
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.750
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.750
Lus10031073.g Linum usitatissimum Lus10031073.g N 0.750
Lus10035456.g Linum usitatissimum Lus10035456.g N 0.750
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.750
MTR_3g067870 Medicago truncatula MTR_3g067870 N 0.745
MTR_1g106070 Medicago truncatula MTR_1g106070 N 0.742
Bo4g165540 Brassica oleracea Bo4g165540 N 0.729
Bra011938 Brassica rapa Bra011938 N 0.729
Bra020247 Brassica rapa Bra020247 N 0.729
GLYMA10G10610 Glycine max GLYMA10G10610 N 0.729
GLYMA10G10690 Glycine max GLYMA10G10690 N 0.729
GLYMA10G10920 Glycine max GLYMA10G10920 N 0.729
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.729
MTR_3g067910 Medicago truncatula MTR_3g067910 N 0.729
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.729
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.729
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.729
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.729
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.729
TCM_006324 Theobroma cacao TCM_006324 N 0.729
Pm016629 Prunus mume Pm016629 N 0.729
29613.m000367 Ricinus communis 29613.m000367 N 0.729
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.729
mgf018529m Mimulus guttatus mgf018529m N 0.729
mgf024307m Mimulus guttatus mgf024307m N 0.729
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.729
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.729
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.729
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.729
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.729
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.729
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.729
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.729
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.729
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.729
MDP0000168914 Malus domestica MDP0000168914 N 0.729
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.729
Thhalv10000432m.g Eutrema salsugineum Thhalv10000432m.g N 0.729
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.729
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.729
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.729
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.729
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.729
Bo4g070340 Brassica oleracea Bo4g070340 N 0.723
PGSC0003DMG400046733 Solanum tuberosum PGSC0003DMG400046733 N 0.723
POPTR_0007s03410 Populus trichocarpa POPTR_0007s03410 N 0.714
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.708
AGL61 Arabidopsis thaliana AT2G24840 N 0.708
Bo2g024910 Brassica oleracea Bo2g024910 N 0.708
Bra026764 Brassica rapa Bra026764 N 0.708
BRADI1G27900 Brachypodium distachyon BRADI1G27900 N 0.708
GLYMA10G10295 Glycine max GLYMA10G10295 N 0.708
MTR_4g036915 Medicago truncatula MTR_4g036915 I 0.708
MTR_7g028448 Medicago truncatula MTR_7g028448 I 0.708
PGSC0003DMG400035221 Solanum tuberosum PGSC0003DMG400035221 N 0.708
PGSC0003DMG400039835 Solanum tuberosum PGSC0003DMG400039835 N 0.708
PGSC0003DMG400040127 Solanum tuberosum PGSC0003DMG400040127 N 0.708
PGSC0003DMG400044513 Solanum tuberosum PGSC0003DMG400044513 N 0.708
PGSC0003DMG400045239 Solanum tuberosum PGSC0003DMG400045239 N 0.708
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.708
POPTR_0017s06710 Populus trichocarpa POPTR_0017s06710 N 0.708
POPTR_0017s06800 Populus trichocarpa POPTR_0017s06800 N 0.708
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.708
Solyc01g060310.1 Solanum lycopersicum Solyc01g060310.1 N 0.708
TCM_029518 Theobroma cacao TCM_029518 I 0.708
27866.m000233 Ricinus communis 27866.m000233 N 0.708
30099.m001671 Ricinus communis 30099.m001671 N 0.708
cassava21573.m1 Manihot esculenta cassava21573.m1 N 0.708
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.708
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.708
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.708
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.708
evm.TU.contig_37718 Carica papaya evm.TU.contig_37718 N 0.708
evm.TU.contig_37906 Carica papaya evm.TU.contig_37906 N 0.708
evm.TU.supercontig_347.14 Carica papaya evm.TU.supercontig_347.14 N 0.708
evm.TU.supercontig_695.8 Carica papaya evm.TU.supercontig_695.8 N 0.708
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.708
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.708
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.708
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N 0.708
LjT01D09.100.nd Lotus japonicus LjT01D09.100.nd N 0.708
Traes_7DS_366A869CF Triticum aestivum Traes_7DS_366A869CF I 0.707
Bra035685 Brassica rapa Bra035685 N 0.702
GLYMA02G35080 Glycine max GLYMA02G35080 N 0.702
PGSC0003DMG400036190 Solanum tuberosum PGSC0003DMG400036190 N 0.702
PGSC0003DMG400046706 Solanum tuberosum PGSC0003DMG400046706 N 0.702
Solyc01g060300.1 Solanum lycopersicum Solyc01g060300.1 N 0.702