Solyc01g060310.1 (Solanum lycopersicum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Solyc01g060310.1 T256291_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc01g060310.1.1 MADS box 14 60

Links

Other MADS box family TFs
Other Solanum lycopersicum TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400006290 Solanum tuberosum PGSC0003DMG400006290 N 0.957
Solyc01g060300.1 Solanum lycopersicum Solyc01g060300.1 N 0.957
PGSC0003DMG400041956 Solanum tuberosum PGSC0003DMG400041956 N 0.870
PGSC0003DMG400046706 Solanum tuberosum PGSC0003DMG400046706 N 0.851
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.771
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.771
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.750
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.750
PGSC0003DMG400046733 Solanum tuberosum PGSC0003DMG400046733 N 0.745
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.745
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.745
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.729
Bra002480 Brassica rapa Bra002480 N 0.729
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.729
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.729
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.729
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.729
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.729
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.729
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.729
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.729
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.729
mgf022147m Mimulus guttatus mgf022147m N 0.729
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.729
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.729
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.729
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.729
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.729
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.729
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.729
AGL62 Arabidopsis thaliana AT5G60440 I 0.729
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.729
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.729
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.729
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.729
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.729
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.729
PGSC0003DMG400039835 Solanum tuberosum PGSC0003DMG400039835 N 0.729
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.729
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.723
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.723
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.723
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.723
Pm021071 Prunus mume Pm021071 N 0.723
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.723
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.723
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.723
PGSC0003DMG400038207 Solanum tuberosum PGSC0003DMG400038207 I 0.723
PGSC0003DMG400034832 Solanum tuberosum PGSC0003DMG400034832 N 0.714
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.708
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.708
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.708
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.708
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.708
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.708
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.708
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.708
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.708
27866.m000233 Ricinus communis 27866.m000233 N 0.708
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.708
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.708
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.708
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.708
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.708
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.708
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.708
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.708
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.708
Bo9g142570 Brassica oleracea Bo9g142570 N 0.708
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.708
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.708
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.708
POPTR_0017s06710 Populus trichocarpa POPTR_0017s06710 N 0.708
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.708
Ca_04665 Cicer arietinum Ca_04665 N 0.708
POPTR_0017s06800 Populus trichocarpa POPTR_0017s06800 N 0.708
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.708
30099.m001672 Ricinus communis 30099.m001672 N 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.708
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.702
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.702
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.702
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.702
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.702
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.702
Ca_04662 Cicer arietinum Ca_04662 N 0.702
PGSC0003DMG400043978 Solanum tuberosum PGSC0003DMG400043978 N 0.702
evm.TU.contig_43014 Carica papaya evm.TU.contig_43014 N 0.702
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.702
evm.TU.contig_37489 Carica papaya evm.TU.contig_37489 N 0.700