PGSC0003DMG400006290 (Solanum tuberosum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PGSC0003DMG400006290 T255612_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400016092 MADS box 14 60

Links

Other MADS box family TFs
Other Solanum tuberosum TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc01g060300.1 Solanum lycopersicum Solyc01g060300.1 N 0.957
Solyc01g060310.1 Solanum lycopersicum Solyc01g060310.1 N 0.957
PGSC0003DMG400041956 Solanum tuberosum PGSC0003DMG400041956 N 0.891
PGSC0003DMG400046706 Solanum tuberosum PGSC0003DMG400046706 N 0.872
PGSC0003DMG400046733 Solanum tuberosum PGSC0003DMG400046733 N 0.766
PGSC0003DMG400039835 Solanum tuberosum PGSC0003DMG400039835 N 0.750
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.750
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.750
PGSC0003DMG400038207 Solanum tuberosum PGSC0003DMG400038207 I 0.745
27866.m000233 Ricinus communis 27866.m000233 N 0.729
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.729
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.729
PGSC0003DMG400043978 Solanum tuberosum PGSC0003DMG400043978 N 0.723
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.723
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.723
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.708
AGL62 Arabidopsis thaliana AT5G60440 I 0.708
Bra002480 Brassica rapa Bra002480 N 0.708
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.708
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.708
GRMZM2G137289 Zea mays GRMZM2G137289 I 0.708
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.708
OGLUM06G17310 Oryza glumaepatula OGLUM06G17310 N 0.708
OMERI06G17150 Oryza meridionalis OMERI06G17150 N 0.708
ONIVA06G15740 Oryza nivara ONIVA06G15740 N 0.708
ORGLA06G0135200 Oryza glaberrima ORGLA06G0135200 N 0.708
ORUFI06G17170 Oryza rufipogon ORUFI06G17170 N 0.708
OS06G0504100 Oryza sativa OS06G0504100 N 0.708
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.708
POPTR_0017s06710 Populus trichocarpa POPTR_0017s06710 N 0.708
POPTR_0017s06800 Populus trichocarpa POPTR_0017s06800 N 0.708
POPTR_0017s06810 Populus trichocarpa POPTR_0017s06810 N 0.708
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.708
mgf022147m Mimulus guttatus mgf022147m N 0.708
Aquca_032_00047 Aquilegia coerulea Aquca_032_00047 I 0.708
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.708
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.708
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.708
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.708
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.708
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.708
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.708
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.708
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.708
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.708
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.708
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.708
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.708
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.708
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.708
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.708
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.708
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.708
Lus10031073.g Linum usitatissimum Lus10031073.g N 0.708
SapurV1A.0150s0040 Salix purpurea SapurV1A.0150s0040 N 0.708
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.702
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.702
OPUNC06G14730 Oryza punctata OPUNC06G14730 N 0.702
PGSC0003DMG400036190 Solanum tuberosum PGSC0003DMG400036190 N 0.702
PGSC0003DMG401015205 Solanum tuberosum PGSC0003DMG401015205 I 0.702
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.702
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.702
Pm021071 Prunus mume Pm021071 N 0.702
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.702
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.702
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.702