GLYMA13G39016 (Glycine max)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GLYMA13G39016 T254205_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G39016.1 MADS box 19 66

Links

Other MADS box family TFs
Other Glycine max TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.917
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.896
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.896
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.896
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.896
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.896
Ca_04665 Cicer arietinum Ca_04665 N 0.896
AGL62 Arabidopsis thaliana AT5G60440 I 0.875
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.875
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.875
30099.m001672 Ricinus communis 30099.m001672 N 0.875
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.875
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.854
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.854
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.854
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.854
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.854
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.854
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.854
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.854
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.854
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.854
Ca_04659 Cicer arietinum Ca_04659 N 0.854
Ca_04660 Cicer arietinum Ca_04660 N 0.854
Ca_04662 Cicer arietinum Ca_04662 N 0.854
Cla006571 Citrullus lanatus Cla006571 N 0.854
Pm021071 Prunus mume Pm021071 N 0.854
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.854
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.854
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.854
Bo9g142570 Brassica oleracea Bo9g142570 N 0.833
Bra002480 Brassica rapa Bra002480 N 0.833
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.833
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.833
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.833
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.833
Ca_04661 Cicer arietinum Ca_04661 N 0.833
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.833
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.833
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.833
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.833
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.833
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.833
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.833
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.833
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.833
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.833
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.833
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.833
MDP0000221590 Malus domestica MDP0000221590 N 0.833
MDP0000434703 Malus domestica MDP0000434703 I 0.833
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.833
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.833
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.833
Bo1g112460 Brassica oleracea Bo1g112460 N 0.812
Bo5g113750 Brassica oleracea Bo5g113750 N 0.812
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.812
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.812
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.812
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.812
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.812
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.812
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.812
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.812
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.812
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.812
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.812
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.812
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.812
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.812
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.812
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.812
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.812
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.812
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.812
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.812
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.812
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.812
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.812
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.812
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.812
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.812
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.812
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.812
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.812
MDP0000233925 Malus domestica MDP0000233925 N 0.812
MDP0000278770 Malus domestica MDP0000278770 N 0.812
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.812
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.812
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.812
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.792
Bra022434 Brassica rapa Bra022434 N 0.792
Bra038225 Brassica rapa Bra038225 N 0.792
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.792
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.792
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.792
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.792
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.792
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.792
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.792
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.792
TCM_006323 Theobroma cacao TCM_006323 N 0.792
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.792
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.792
Pm021017 Prunus mume Pm021017 N 0.792
Pm021018 Prunus mume Pm021018 N 0.792
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.792
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.792
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.792
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.792
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.792
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.792
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.792
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.792
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.771
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.771
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.771
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.771
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.771
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.771
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.771
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.771
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.771
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.771
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.771
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.771
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.771
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.771
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.771
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.771
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.771
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.771
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.771
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.771
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.771
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.771
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.750
MTR_0121s0080 Medicago truncatula MTR_0121s0080 N 0.750
MTR_0121s0100 Medicago truncatula MTR_0121s0100 N 0.750
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.750
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.750
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.750
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.750
mgf022790m Mimulus guttatus mgf022790m N 0.750
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.750
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.750
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.750
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.750
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.750
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.750
Lus10031073.g Linum usitatissimum Lus10031073.g N 0.750
Lus10035456.g Linum usitatissimum Lus10035456.g N 0.750
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.750
AGL28 Arabidopsis thaliana AT1G01530 N 0.729
Bra011938 Brassica rapa Bra011938 N 0.729
GLYMA10G10840 Glycine max GLYMA10G10840 N 0.729
GLYMA10G10860 Glycine max GLYMA10G10860 N 0.729
GLYMA10G10930 Glycine max GLYMA10G10930 N 0.729
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.729
POPTR_0017s06710 Populus trichocarpa POPTR_0017s06710 N 0.729
POPTR_0017s06800 Populus trichocarpa POPTR_0017s06800 N 0.729
Solyc01g060310.1 Solanum lycopersicum Solyc01g060310.1 N 0.729
TCM_040735 Theobroma cacao TCM_040735 N 0.729
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.729
27866.m000233 Ricinus communis 27866.m000233 N 0.729
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.729
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.729
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.729
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.729
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.729
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.729
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N 0.729
LjT01D09.100.nd Lotus japonicus LjT01D09.100.nd N 0.729
Bo4g070340 Brassica oleracea Bo4g070340 N 0.723
AGL23 Arabidopsis thaliana AT1G65360 N 0.708
Bra020247 Brassica rapa Bra020247 N 0.708
GLYMA10G10640 Glycine max GLYMA10G10640 N 0.708
GLYMA10G10770 Glycine max GLYMA10G10770 N 0.708
GLYMA10G10900 Glycine max GLYMA10G10900 N 0.708
GLYMA10G11450 Glycine max GLYMA10G11450 N 0.708
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.708
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.708
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.708
PGSC0003DMG400006290 Solanum tuberosum PGSC0003DMG400006290 N 0.708
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.708
PGSC0003DMG400036190 Solanum tuberosum PGSC0003DMG400036190 N 0.708
PGSC0003DMG400040127 Solanum tuberosum PGSC0003DMG400040127 N 0.708
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.708
POPTR_0017s06810 Populus trichocarpa POPTR_0017s06810 N 0.708
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.708
Solyc01g060300.1 Solanum lycopersicum Solyc01g060300.1 N 0.708
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.708
TCM_006324 Theobroma cacao TCM_006324 N 0.708
Ca_07607 Cicer arietinum Ca_07607 N 0.708
Ca_26354 Cicer arietinum Ca_26354 N 0.708
Pm021070 Prunus mume Pm021070 N 0.708
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.708
mgf018529m Mimulus guttatus mgf018529m N 0.708
mgf022147m Mimulus guttatus mgf022147m N 0.708
mgf024307m Mimulus guttatus mgf024307m N 0.708
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.708
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.708
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.708
evm.TU.contig_43014 Carica papaya evm.TU.contig_43014 N 0.708
evm.TU.supercontig_695.8 Carica papaya evm.TU.supercontig_695.8 N 0.708
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.708
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.708
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.708
MDP0000168914 Malus domestica MDP0000168914 N 0.708
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.708
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.708
Thhalv10003315m.g Eutrema salsugineum Thhalv10003315m.g N 0.708
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.708
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.708
LjSGA_082681.2 Lotus japonicus LjSGA_082681.2 N 0.708
LjSGA_120826.2 Lotus japonicus LjSGA_120826.2 N 0.708