LjSGA_120826.2 (Lotus japonicus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 LjSGA_120826.2 T259403_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_120826.2 MADS box 18 65

Links

Other MADS box family TFs
Other Lotus japonicus TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LjSGA_082681.2 Lotus japonicus LjSGA_082681.2 N 1.000
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N 0.979
LjT01D09.100.nd Lotus japonicus LjT01D09.100.nd N 0.979
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.750
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.750
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.750
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.750
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.750
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.750
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.750
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.737
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.729
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.729
30099.m001672 Ricinus communis 30099.m001672 N 0.729
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.729
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.729
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.729
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.729
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.729
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.729
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.729
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.729
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.729
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.729
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.729
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.729
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.729
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.729
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.729
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.729
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.729
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.729
LjSGA_020620.1 Lotus japonicus LjSGA_020620.1 N 0.729
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.708
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.708
Bo5g113750 Brassica oleracea Bo5g113750 N 0.708
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.708
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.708
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.708
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.708
Ca_04659 Cicer arietinum Ca_04659 N 0.708
Ca_04660 Cicer arietinum Ca_04660 N 0.708
Ca_04665 Cicer arietinum Ca_04665 N 0.708
Cla006571 Citrullus lanatus Cla006571 N 0.708
Pm021018 Prunus mume Pm021018 N 0.708
Pm021071 Prunus mume Pm021071 N 0.708
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.708
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.708
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.708
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.708
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.708
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.708
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.708
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.708
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.708
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.708
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.708
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.708
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.708
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.708
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.708
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.708
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.708
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.708
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.708
MDP0000221590 Malus domestica MDP0000221590 N 0.708
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.708
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.708
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.708