Ca_04665 (Cicer arietinum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Ca_04665 T256892_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_04665 MADS box 17 64

Links

Other MADS box family TFs
Other Cicer arietinum TFs

259 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.979
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.979
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.979
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.979
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.979
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.958
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.958
Ca_04659 Cicer arietinum Ca_04659 N 0.958
Ca_04660 Cicer arietinum Ca_04660 N 0.958
AGL62 Arabidopsis thaliana AT5G60440 I 0.938
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.938
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.938
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.938
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.938
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.938
Ca_04662 Cicer arietinum Ca_04662 N 0.938
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.917
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.917
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.917
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.917
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.917
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.917
Pm021071 Prunus mume Pm021071 N 0.917
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.896
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.896
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.896
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.896
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.896
Ca_04661 Cicer arietinum Ca_04661 N 0.896
Cla006571 Citrullus lanatus Cla006571 N 0.896
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.896
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.896
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.896
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.896
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.896
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.896
MDP0000434703 Malus domestica MDP0000434703 I 0.896
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.896
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.896
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.875
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.875
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.875
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.875
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.875
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.875
30099.m001672 Ricinus communis 30099.m001672 N 0.875
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.875
MDP0000233925 Malus domestica MDP0000233925 N 0.875
MDP0000278770 Malus domestica MDP0000278770 N 0.875
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.875
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.875
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.854
Bo1g112460 Brassica oleracea Bo1g112460 N 0.854
Bo9g142570 Brassica oleracea Bo9g142570 N 0.854
Bra002480 Brassica rapa Bra002480 N 0.854
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.854
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.854
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.854
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.854
TCM_006323 Theobroma cacao TCM_006323 N 0.854
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.854
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.854
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.854
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.854
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.854
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.854
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.854
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.854
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.854
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.854
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.854
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.854
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.854
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.854
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.841
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.833
Bo5g113750 Brassica oleracea Bo5g113750 N 0.833
Bra038225 Brassica rapa Bra038225 N 0.833
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.833
MTR_0121s0080 Medicago truncatula MTR_0121s0080 N 0.833
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.833
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.833
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.833
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.833
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.833
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.833
Pm021018 Prunus mume Pm021018 N 0.833
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.833
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.833
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.833
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.833
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.833
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.833
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.833
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.833
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.833
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.833
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.833
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.833
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.833
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.833
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.833
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.833
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.833
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.833
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.833
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.833
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.833
MDP0000221590 Malus domestica MDP0000221590 N 0.833
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.833
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.816
Bra022434 Brassica rapa Bra022434 N 0.812
MTR_0121s0100 Medicago truncatula MTR_0121s0100 N 0.812
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.812
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.812
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.812
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.812
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.812
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.812
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.812
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.812
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.812
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.812
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.792
AGL28 Arabidopsis thaliana AT1G01530 N 0.792
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.792
mgf022790m Mimulus guttatus mgf022790m N 0.792
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.792
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.792
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.792
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.792
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.792
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.792
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.792
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.792
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.792
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.792
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.792
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.771
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.771
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.771
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.771
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.771
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.771
Ca_07607 Cicer arietinum Ca_07607 N 0.771
Ca_26354 Cicer arietinum Ca_26354 N 0.771
Pm021017 Prunus mume Pm021017 N 0.771
Pm021070 Prunus mume Pm021070 N 0.771
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.771
mgf022147m Mimulus guttatus mgf022147m N 0.771
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.771
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.771
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.771
Lus10031073.g Linum usitatissimum Lus10031073.g N 0.771
Lus10035456.g Linum usitatissimum Lus10035456.g N 0.771
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.771
AGL23 Arabidopsis thaliana AT1G65360 N 0.750
Bo4g165540 Brassica oleracea Bo4g165540 N 0.750
Bra020247 Brassica rapa Bra020247 N 0.750
GLYMA10G10840 Glycine max GLYMA10G10840 N 0.750
GLYMA10G10860 Glycine max GLYMA10G10860 N 0.750
GLYMA10G10930 Glycine max GLYMA10G10930 N 0.750
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.750
MTR_1g075570 Medicago truncatula MTR_1g075570 N 0.750
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.750
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.750
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.750
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.750
TCM_040735 Theobroma cacao TCM_040735 N 0.750
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.750
Pm016629 Prunus mume Pm016629 N 0.750
29613.m000367 Ricinus communis 29613.m000367 N 0.750
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.750
mgf018529m Mimulus guttatus mgf018529m N 0.750
mgf024307m Mimulus guttatus mgf024307m N 0.750
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.750
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.750
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.750
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.750
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.750
evm.TU.contig_37489 Carica papaya evm.TU.contig_37489 N 0.750
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.750
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.750
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.750
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.750
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.750
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.750
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.750
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.750
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.750
MDP0000168914 Malus domestica MDP0000168914 N 0.750
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.750
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.750
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.750
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.750
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.750
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.750
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.729
AGL61 Arabidopsis thaliana AT2G24840 N 0.729
Bo2g024910 Brassica oleracea Bo2g024910 N 0.729
Bra011938 Brassica rapa Bra011938 N 0.729
Bra026764 Brassica rapa Bra026764 N 0.729
GLYMA10G10640 Glycine max GLYMA10G10640 N 0.729
GLYMA10G10770 Glycine max GLYMA10G10770 N 0.729
GLYMA10G10900 Glycine max GLYMA10G10900 N 0.729
GLYMA10G11450 Glycine max GLYMA10G11450 N 0.729
MTR_3g067870 Medicago truncatula MTR_3g067870 N 0.729
MTR_3g067910 Medicago truncatula MTR_3g067910 N 0.729
PGSC0003DMG400035221 Solanum tuberosum PGSC0003DMG400035221 N 0.729
PGSC0003DMG400040127 Solanum tuberosum PGSC0003DMG400040127 N 0.729
PGSC0003DMG400044513 Solanum tuberosum PGSC0003DMG400044513 N 0.729
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.729
30099.m001671 Ricinus communis 30099.m001671 N 0.729
cassava21573.m1 Manihot esculenta cassava21573.m1 N 0.729
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.729
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.729
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.729
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.729
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.729
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.729
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N 0.729
LjT01D09.100.nd Lotus japonicus LjT01D09.100.nd N 0.729
MTR_1g106070 Medicago truncatula MTR_1g106070 N 0.726
Bo4g070340 Brassica oleracea Bo4g070340 N 0.723
Bra035685 Brassica rapa Bra035685 N 0.708
F775_04223 Aegilops tauschii F775_04223 I 0.708
GLYMA10G10610 Glycine max GLYMA10G10610 N 0.708
GLYMA10G10690 Glycine max GLYMA10G10690 N 0.708
GLYMA10G10920 Glycine max GLYMA10G10920 N 0.708
MTR_4g036915 Medicago truncatula MTR_4g036915 I 0.708
MTR_7g028448 Medicago truncatula MTR_7g028448 I 0.708
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.708
PGSC0003DMG400045239 Solanum tuberosum PGSC0003DMG400045239 N 0.708
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.708
POPTR_0017s06710 Populus trichocarpa POPTR_0017s06710 N 0.708
POPTR_0017s06800 Populus trichocarpa POPTR_0017s06800 N 0.708
Solyc01g060310.1 Solanum lycopersicum Solyc01g060310.1 N 0.708
Solyc04g025050.1 Solanum lycopersicum Solyc04g025050.1 N 0.708
TCM_006324 Theobroma cacao TCM_006324 N 0.708
TCM_029518 Theobroma cacao TCM_029518 I 0.708
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.708
27866.m000233 Ricinus communis 27866.m000233 N 0.708
29838.m001672 Ricinus communis 29838.m001672 N 0.708
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.708
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.708
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.708
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.708
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.708
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.708
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.708
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.708
Thhalv10000432m.g Eutrema salsugineum Thhalv10000432m.g N 0.708
Thhalv10028255m.g Eutrema salsugineum Thhalv10028255m.g N 0.708
chr1.LjB17A22.60.nc Lotus japonicus chr1.LjB17A22.60.nc N 0.708
chr2.CM0250.170.nc Lotus japonicus chr2.CM0250.170.nc N 0.708
LjSGA_020620.1 Lotus japonicus LjSGA_020620.1 N 0.708
LjSGA_082681.2 Lotus japonicus LjSGA_082681.2 N 0.708
LjSGA_120826.2 Lotus japonicus LjSGA_120826.2 N 0.708
Solyc01g060300.1 Solanum lycopersicum Solyc01g060300.1 N 0.702