Pm021017 (Prunus mume)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pm021017 T257070_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm021017 MADS box 15 62

Links

Other MADS box family TFs
Other Prunus mume TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 1.000
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.833
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.833
30099.m001672 Ricinus communis 30099.m001672 N 0.812
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.812
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.812
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.812
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.812
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.812
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.812
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.812
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.812
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.812
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.812
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.812
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.812
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.812
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.812
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.812
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.812
evm.TU.contig_37489 Carica papaya evm.TU.contig_37489 N 0.800
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.792
Bo5g113750 Brassica oleracea Bo5g113750 N 0.792
Bra022434 Brassica rapa Bra022434 N 0.792
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.792
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.792
Ca_04659 Cicer arietinum Ca_04659 N 0.792
Ca_04660 Cicer arietinum Ca_04660 N 0.792
Cla006571 Citrullus lanatus Cla006571 N 0.792
Pm021018 Prunus mume Pm021018 N 0.792
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.792
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.792
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.792
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.792
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.792
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.792
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.792
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.792
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.792
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.792
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.792
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.792
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.792
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.792
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.792
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.792
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.792
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.792
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.792
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.792
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.792
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.792
MDP0000434703 Malus domestica MDP0000434703 I 0.792
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.792
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.792
Bo1g112460 Brassica oleracea Bo1g112460 N 0.771
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.771
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.771
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.771
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.771
TCM_006323 Theobroma cacao TCM_006323 N 0.771
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.771
Ca_04661 Cicer arietinum Ca_04661 N 0.771
Ca_04665 Cicer arietinum Ca_04665 N 0.771
Pm021071 Prunus mume Pm021071 N 0.771
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.771
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.771
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.771
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.771
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.771
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.771
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.771
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.771
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.771
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.771
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.771
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.771
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.771
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.771
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.771
MDP0000233925 Malus domestica MDP0000233925 N 0.771
MDP0000278770 Malus domestica MDP0000278770 N 0.771
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.771
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.771
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.771
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.771
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.771
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.771
AGL62 Arabidopsis thaliana AT5G60440 I 0.750
Bra038225 Brassica rapa Bra038225 N 0.750
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.750
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.750
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.750
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.750
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.750
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.750
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.750
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.750
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.750
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.750
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.750
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.750
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.750
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.750
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.750
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.750
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.750
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.750
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.750
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.750
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.750
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.750
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.750
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.750
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.750
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.750
evm.TU.contig_46312 Carica papaya evm.TU.contig_46312 N 0.750
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.750
MDP0000221590 Malus domestica MDP0000221590 N 0.750
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.750
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.729
AGL61 Arabidopsis thaliana AT2G24840 N 0.729
Bo8g099550 Brassica oleracea Bo8g099550 N 0.729
Bo9g142570 Brassica oleracea Bo9g142570 N 0.729
Bra002480 Brassica rapa Bra002480 N 0.729
Bra007829 Brassica rapa Bra007829 N 0.729
Bra011938 Brassica rapa Bra011938 N 0.729
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.729
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.729
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.729
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.729
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.729
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.729
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.729
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.729
mgf022147m Mimulus guttatus mgf022147m N 0.729
mgf022790m Mimulus guttatus mgf022790m N 0.729
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.729
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.729
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.729
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.729
evm.TU.contig_37718 Carica papaya evm.TU.contig_37718 N 0.729
evm.TU.contig_37906 Carica papaya evm.TU.contig_37906 N 0.729
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.729
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.729
evm.TU.supercontig_695.8 Carica papaya evm.TU.supercontig_695.8 N 0.729
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.729
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.729
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.729
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.729
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.729
Bo4g070340 Brassica oleracea Bo4g070340 N 0.723
PGSC0003DMG400034832 Solanum tuberosum PGSC0003DMG400034832 N 0.714
evm.TU.supercontig_2593.1 Carica papaya evm.TU.supercontig_2593.1 N 0.714
evm.TU.supercontig_695.6 Carica papaya evm.TU.supercontig_695.6 N 0.711
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.708
AGL28 Arabidopsis thaliana AT1G01530 N 0.708
Bo4g157220 Brassica oleracea Bo4g157220 N 0.708
Bo4g165540 Brassica oleracea Bo4g165540 N 0.708
Bra026764 Brassica rapa Bra026764 N 0.708
Bra032057 Brassica rapa Bra032057 N 0.708
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.708
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.708
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.708
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.708
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.708
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.708
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.708
Ca_04662 Cicer arietinum Ca_04662 N 0.708
Pm021070 Prunus mume Pm021070 N 0.708
29613.m000367 Ricinus communis 29613.m000367 N 0.708
29838.m001672 Ricinus communis 29838.m001672 N 0.708
30099.m001671 Ricinus communis 30099.m001671 N 0.708
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.708
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.708
evm.TU.contig_30005.2 Carica papaya evm.TU.contig_30005.2 N 0.708
evm.TU.contig_31965.1 Carica papaya evm.TU.contig_31965.1 N 0.708
evm.TU.contig_35554.1 Carica papaya evm.TU.contig_35554.1 N 0.708
evm.TU.contig_38802 Carica papaya evm.TU.contig_38802 N 0.708
evm.TU.supercontig_106.21 Carica papaya evm.TU.supercontig_106.21 N 0.708
evm.TU.supercontig_347.14 Carica papaya evm.TU.supercontig_347.14 N 0.708
evm.TU.supercontig_348.10 Carica papaya evm.TU.supercontig_348.10 N 0.708
evm.TU.supercontig_348.1 Carica papaya evm.TU.supercontig_348.1 N 0.708
evm.TU.supercontig_625.2 Carica papaya evm.TU.supercontig_625.2 N 0.708
Gorai.012G163200 Gossypium raimondii Gorai.012G163200 N 0.708
Gorai.N026300 Gossypium raimondii Gorai.N026300 N 0.708
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.708
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.708
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.708
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.708
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.708