evm.TU.contig_37906 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_37906 T258109_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_37906.1 MADS box 20 67

Links

Other MADS box family TFs
Other Carica papaya TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.contig_37718 Carica papaya evm.TU.contig_37718 N 1.000
evm.TU.contig_30005.2 Carica papaya evm.TU.contig_30005.2 N 0.979
evm.TU.contig_31965.1 Carica papaya evm.TU.contig_31965.1 N 0.979
evm.TU.contig_35554.1 Carica papaya evm.TU.contig_35554.1 N 0.979
evm.TU.contig_38802 Carica papaya evm.TU.contig_38802 N 0.979
evm.TU.supercontig_347.14 Carica papaya evm.TU.supercontig_347.14 N 0.979
evm.TU.supercontig_347.5 Carica papaya evm.TU.supercontig_347.5 N 0.979
evm.TU.supercontig_348.10 Carica papaya evm.TU.supercontig_348.10 N 0.979
evm.TU.contig_43437.1 Carica papaya evm.TU.contig_43437.1 N 0.958
evm.TU.contig_46312 Carica papaya evm.TU.contig_46312 N 0.958
evm.TU.supercontig_2423.4 Carica papaya evm.TU.supercontig_2423.4 N 0.958
evm.TU.supercontig_439.5 Carica papaya evm.TU.supercontig_439.5 N 0.958
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.729
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.729
Pm021017 Prunus mume Pm021017 N 0.729
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.729
MDP0000233925 Malus domestica MDP0000233925 N 0.729
MDP0000278770 Malus domestica MDP0000278770 N 0.729
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.708
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.708
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.708
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.708
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.708
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.708
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.708
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.708
Ca_04659 Cicer arietinum Ca_04659 N 0.708
Ca_04660 Cicer arietinum Ca_04660 N 0.708
MDP0000434703 Malus domestica MDP0000434703 I 0.708