evm.TU.contig_46312 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_46312 T258135_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_46312.1 MADS box 20 43

Links

Other MADS box family TFs
Other Carica papaya TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.contig_37718 Carica papaya evm.TU.contig_37718 N 0.958
evm.TU.contig_37906 Carica papaya evm.TU.contig_37906 N 0.958
evm.TU.supercontig_347.14 Carica papaya evm.TU.supercontig_347.14 N 0.958
evm.TU.supercontig_348.10 Carica papaya evm.TU.supercontig_348.10 N 0.958
evm.TU.supercontig_347.5 Carica papaya evm.TU.supercontig_347.5 N 0.875
Bo9g142570 Brassica oleracea Bo9g142570 N 0.792
Bra002480 Brassica rapa Bra002480 N 0.792
Ca_04662 Cicer arietinum Ca_04662 N 0.792
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.750
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.750
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.750
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.750
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.750
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.750
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.750
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.750
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.750
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.750
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.750
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.750
Ca_04659 Cicer arietinum Ca_04659 N 0.750
Ca_04660 Cicer arietinum Ca_04660 N 0.750
Pm021017 Prunus mume Pm021017 N 0.750
Pm021018 Prunus mume Pm021018 N 0.750
Pm021071 Prunus mume Pm021071 N 0.750
30099.m001672 Ricinus communis 30099.m001672 N 0.750
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.750
mgf022790m Mimulus guttatus mgf022790m N 0.750
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.750
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.750
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.750
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.750
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.750
MDP0000233925 Malus domestica MDP0000233925 N 0.750
MDP0000278770 Malus domestica MDP0000278770 N 0.750
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.750
AGL71 Arabidopsis lyrata Al_scaffold_0008_1558 I 0.708
AGL72 Arabidopsis thaliana AT5G51860 I 0.708
AGL71 Arabidopsis thaliana AT5G51870 I 0.708
Bra011938 Brassica rapa Bra011938 N 0.708
Bra022434 Brassica rapa Bra022434 N 0.708
Bra038225 Brassica rapa Bra038225 N 0.708
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.708
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.708
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.708
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.708
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.708
OPUNC12G11630 Oryza punctata OPUNC12G11630 I 0.708
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.708
scaffold_801621.1 Arabidopsis lyrata scaffold_801621.1 I 0.708
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.708
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.708
Bostr.15774s0334 Boechera stricta Bostr.15774s0334 I 0.708
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.708
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.708
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.708
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.708
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.708
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.708
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.708
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.708
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.708
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.708
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.708
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.708
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.708
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.708
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.708
evm.TU.supercontig_900.5 Carica papaya evm.TU.supercontig_900.5 N 0.708
Gorai.012G163200 Gossypium raimondii Gorai.012G163200 N 0.708
Gorai.N026300 Gossypium raimondii Gorai.N026300 N 0.708
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.708
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.708
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.708