evm.TU.supercontig_348.9 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.supercontig_348.9 T258244_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_348.9 MADS box 15 62

Links

Other MADS box family TFs
Other Carica papaya TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.896
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.875
evm.TU.supercontig_695.8 Carica papaya evm.TU.supercontig_695.8 N 0.875
evm.TU.supercontig_348.1 Carica papaya evm.TU.supercontig_348.1 N 0.854
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.833
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.833
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.833
evm.TU.contig_37107 Carica papaya evm.TU.contig_37107 N 0.833
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.833
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.833
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.812
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.812
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.812
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.812
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.812
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.812
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.812
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.812
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.812
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.812
evm.TU.supercontig_695.2 Carica papaya evm.TU.supercontig_695.2 N 0.812
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.812
evm.TU.contig_37489 Carica papaya evm.TU.contig_37489 N 0.800
30099.m001672 Ricinus communis 30099.m001672 N 0.792
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.792
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.792
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.792
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.792
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.792
evm.TU.contig_38552 Carica papaya evm.TU.contig_38552 N 0.792
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.792
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.792
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.792
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.792
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.792
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.792
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.792
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.792
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.792
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.792
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.792
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.792
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.771
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.771
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.771
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.771
Cla006571 Citrullus lanatus Cla006571 N 0.771
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.771
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.771
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.771
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.771
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.771
evm.TU.contig_31904 Carica papaya evm.TU.contig_31904 N 0.771
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.771
evm.TU.contig_36403 Carica papaya evm.TU.contig_36403 N 0.771
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.771
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.771
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.771
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.771
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.771
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.771
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.771
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.771
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.771
Bra022434 Brassica rapa Bra022434 N 0.750
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.750
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.750
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.750
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.750
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.750
TCM_006323 Theobroma cacao TCM_006323 N 0.750
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.750
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.750
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.750
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.750
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.750
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.750
evm.TU.supercontig_106.21 Carica papaya evm.TU.supercontig_106.21 N 0.750
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.750
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.750
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.750
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.750
Bo5g113750 Brassica oleracea Bo5g113750 N 0.729
Bra002480 Brassica rapa Bra002480 N 0.729
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.729
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.729
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.729
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.729
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.729
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.729
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.729
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.729
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.729
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.729
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.729
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.729
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.729
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.729
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.729
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.729
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.729
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.729
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.729
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.729
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.729
Pm021017 Prunus mume Pm021017 N 0.729
Pm021071 Prunus mume Pm021071 N 0.729
29613.m000367 Ricinus communis 29613.m000367 N 0.729
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.729
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.729
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.729
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.729
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.729
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.729
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.729
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.729
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.729
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.729
PGSC0003DMG400034832 Solanum tuberosum PGSC0003DMG400034832 N 0.714
evm.TU.supercontig_2593.1 Carica papaya evm.TU.supercontig_2593.1 N 0.714
evm.TU.supercontig_695.6 Carica papaya evm.TU.supercontig_695.6 N 0.711
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.708
AGL62 Arabidopsis thaliana AT5G60440 I 0.708
Bo1g112460 Brassica oleracea Bo1g112460 N 0.708
Bo9g142570 Brassica oleracea Bo9g142570 N 0.708
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.708
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.708
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.708
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.708
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.708
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.708
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.708
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.708
TCM_040735 Theobroma cacao TCM_040735 N 0.708
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.708
Ca_04659 Cicer arietinum Ca_04659 N 0.708
Ca_04660 Cicer arietinum Ca_04660 N 0.708
Ca_04661 Cicer arietinum Ca_04661 N 0.708
Ca_04665 Cicer arietinum Ca_04665 N 0.708
Pm021018 Prunus mume Pm021018 N 0.708
Pm021070 Prunus mume Pm021070 N 0.708
30099.m001671 Ricinus communis 30099.m001671 N 0.708
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.708
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.708
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.708
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.708
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.708
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.708
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.708
evm.TU.contig_46312 Carica papaya evm.TU.contig_46312 N 0.708
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.708
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.708
MDP0000168914 Malus domestica MDP0000168914 N 0.708
MDP0000434703 Malus domestica MDP0000434703 I 0.708
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.708
SapurV1A.1128s0080 Salix purpurea SapurV1A.1128s0080 N 0.708
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.708
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.708
evm.TU.contig_27553.5 Carica papaya evm.TU.contig_27553.5 N 0.702
evm.TU.contig_47064.2 Carica papaya evm.TU.contig_47064.2 N 0.702