Pm021070 (Prunus mume)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pm021070 T257072_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm021070 MADS box 19 66

Links

Other MADS box family TFs
Other Prunus mume TFs

271 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 1.000
MDP0000168914 Malus domestica MDP0000168914 N 0.958
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.917
Pm016629 Prunus mume Pm016629 N 0.917
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.917
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.896
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.896
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.896
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.875
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.875
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.875
Ca_07607 Cicer arietinum Ca_07607 N 0.875
Ca_26354 Cicer arietinum Ca_26354 N 0.875
29613.m000367 Ricinus communis 29613.m000367 N 0.875
mgf018529m Mimulus guttatus mgf018529m N 0.875
mgf024307m Mimulus guttatus mgf024307m N 0.875
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.875
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.875
Bra026764 Brassica rapa Bra026764 N 0.854
30099.m001671 Ricinus communis 30099.m001671 N 0.854
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.854
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.854
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.854
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.854
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.854
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.854
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.854
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.854
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.854
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.854
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.833
AGL61 Arabidopsis thaliana AT2G24840 N 0.833
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.833
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.833
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.833
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.833
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.833
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.833
TCM_040735 Theobroma cacao TCM_040735 N 0.833
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.833
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.833
Cla006571 Citrullus lanatus Cla006571 N 0.833
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.833
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.833
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.833
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.833
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.833
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.833
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.833
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.833
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.833
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.833
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.833
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.833
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.812
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.812
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.812
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.812
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.812
TCM_006323 Theobroma cacao TCM_006323 N 0.812
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.812
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.812
Pm021018 Prunus mume Pm021018 N 0.812
Pm021071 Prunus mume Pm021071 N 0.812
30099.m001672 Ricinus communis 30099.m001672 N 0.812
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.812
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.812
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.812
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.812
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.792
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.792
AGL62 Arabidopsis thaliana AT5G60440 I 0.792
Bo4g165540 Brassica oleracea Bo4g165540 N 0.792
Bo8g099550 Brassica oleracea Bo8g099550 N 0.792
Bra007829 Brassica rapa Bra007829 N 0.792
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.792
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.792
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.792
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.792
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.792
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.792
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.792
mgf023207m Mimulus guttatus mgf023207m N 0.792
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.792
Ciclev10030387m.g Citrus clementina Ciclev10030387m.g N 0.792
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.792
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.792
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.792
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.792
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.792
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.792
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.792
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.792
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.792
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.792
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.792
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.792
MDP0000434703 Malus domestica MDP0000434703 I 0.792
orange1.1g036705m.g Citrus sinensis orange1.1g036705m.g N 0.792
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.792
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.792
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.792
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.792
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.792
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.789
AGL28 Arabidopsis thaliana AT1G01530 N 0.771
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.771
Bo1g112460 Brassica oleracea Bo1g112460 N 0.771
Bra002480 Brassica rapa Bra002480 N 0.771
Bra022434 Brassica rapa Bra022434 N 0.771
Bra032057 Brassica rapa Bra032057 N 0.771
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.771
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.771
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.771
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.771
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.771
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.771
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.771
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.771
Ca_04658 Cicer arietinum Ca_04658 N 0.771
Ca_04659 Cicer arietinum Ca_04659 N 0.771
Ca_04660 Cicer arietinum Ca_04660 N 0.771
Ca_04665 Cicer arietinum Ca_04665 N 0.771
mgf021403m Mimulus guttatus mgf021403m N 0.771
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.771
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.771
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.771
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.771
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.771
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.771
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.771
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.771
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.771
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.771
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.771
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.771
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.771
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.771
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.771
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.771
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.771
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.771
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.771
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.771
MDP0000233925 Malus domestica MDP0000233925 N 0.771
MDP0000278770 Malus domestica MDP0000278770 N 0.771
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.771
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.771
Bra035685 Brassica rapa Bra035685 N 0.766
AGL23 Arabidopsis thaliana AT1G65360 N 0.750
Bo4g157220 Brassica oleracea Bo4g157220 N 0.750
Bo5g113750 Brassica oleracea Bo5g113750 N 0.750
Bo9g142570 Brassica oleracea Bo9g142570 N 0.750
Bra011938 Brassica rapa Bra011938 N 0.750
Bra038225 Brassica rapa Bra038225 N 0.750
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.750
GLYMA17G01771 Glycine max GLYMA17G01771 N 0.750
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.750
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.750
GLYMA20G27361 Glycine max GLYMA20G27361 N 0.750
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.750
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.750
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.750
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.750
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.750
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.750
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.750
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.750
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.750
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.750
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.750
Ca_04661 Cicer arietinum Ca_04661 N 0.750
Ca_04662 Cicer arietinum Ca_04662 N 0.750
cassava21573.m1 Manihot esculenta cassava21573.m1 N 0.750
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.750
mgf020533m Mimulus guttatus mgf020533m N 0.750
mgf022403m Mimulus guttatus mgf022403m N 0.750
mgf024490m Mimulus guttatus mgf024490m N 0.750
mgf025566m Mimulus guttatus mgf025566m N 0.750
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.750
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.750
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.750
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.750
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.750
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.750
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.750
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.750
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.750
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.750
MDP0000221590 Malus domestica MDP0000221590 N 0.750
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.750
SapurV1A.1128s0080 Salix purpurea SapurV1A.1128s0080 N 0.750
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.750
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.750
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.750
Bo4g070340 Brassica oleracea Bo4g070340 N 0.745
PGSC0003DMG400036006 Solanum tuberosum PGSC0003DMG400036006 N 0.745
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.729
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.729
MTR_8g086290 Medicago truncatula MTR_8g086290 N 0.729
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.729
TCM_006324 Theobroma cacao TCM_006324 N 0.729
TCM_006325 Theobroma cacao TCM_006325 N 0.729
Ca_18845 Cicer arietinum Ca_18845 N 0.729
29838.m001672 Ricinus communis 29838.m001672 N 0.729
mgf017842m Mimulus guttatus mgf017842m N 0.729
mgf018184m Mimulus guttatus mgf018184m N 0.729
mgf020939m Mimulus guttatus mgf020939m N 0.729
mgf022147m Mimulus guttatus mgf022147m N 0.729
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.729
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.729
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.729
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.729
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.729
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.729
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.729
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.729
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.729
Gorai.012G163200 Gossypium raimondii Gorai.012G163200 N 0.729
Gorai.N026300 Gossypium raimondii Gorai.N026300 N 0.729
Lus10031073.g Linum usitatissimum Lus10031073.g N 0.729
Thhalv10000432m.g Eutrema salsugineum Thhalv10000432m.g N 0.729
Thhalv10028255m.g Eutrema salsugineum Thhalv10028255m.g N 0.729
chr1.LjB17A22.10.nc Lotus japonicus chr1.LjB17A22.10.nc N 0.729
chr2.CM0250.170.nc Lotus japonicus chr2.CM0250.170.nc N 0.729
chr5.LjT25B19.200.nd Lotus japonicus chr5.LjT25B19.200.nd N 0.729
LjSGA_074894.2 Lotus japonicus LjSGA_074894.2 N 0.729
Bo2g024870 Brassica oleracea Bo2g024870 N 0.708
Bra020242 Brassica rapa Bra020242 N 0.708
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.708
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.708
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.708
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.708
MTR_4g127140 Medicago truncatula MTR_4g127140 N 0.708
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.708
PGSC0003DMG400045239 Solanum tuberosum PGSC0003DMG400045239 N 0.708
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.708
SELMODRAFT_450772 Selaginella moellendorffii SELMODRAFT_450772 N 0.708
SELMODRAFT_450775 Selaginella moellendorffii SELMODRAFT_450775 N 0.708
SELMODRAFT_450776 Selaginella moellendorffii SELMODRAFT_450776 N 0.708
SELMODRAFT_450777 Selaginella moellendorffii SELMODRAFT_450777 N 0.708
TCM_012489 Theobroma cacao TCM_012489 N 0.708
VIT_10s0003g03970 Vitis vinifera VIT_10s0003g03970 N 0.708
Ca_24185 Cicer arietinum Ca_24185 I 0.708
Cla010744 Citrullus lanatus Cla010744 N 0.708
Pm002317 Prunus mume Pm002317 N 0.708
Pm021017 Prunus mume Pm021017 N 0.708
Cucsa.342610 Cucumis sativus Cucsa.342610 N 0.708
mgf022625m Mimulus guttatus mgf022625m N 0.708
mgf022790m Mimulus guttatus mgf022790m N 0.708
Aquca_015_00242 Aquilegia coerulea Aquca_015_00242 N 0.708
Aquca_015_00243 Aquilegia coerulea Aquca_015_00243 N 0.708
Aquca_040_00096 Aquilegia coerulea Aquca_040_00096 N 0.708
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.708
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.708
evm.TU.contig_27553.5 Carica papaya evm.TU.contig_27553.5 N 0.708
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.708
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.708
evm.TU.contig_43014 Carica papaya evm.TU.contig_43014 N 0.708
evm.TU.contig_47064.2 Carica papaya evm.TU.contig_47064.2 N 0.708
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.708
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.708
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.708
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.708
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.708
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.708
Lus10035456.g Linum usitatissimum Lus10035456.g N 0.708
MDP0000274606 Malus domestica MDP0000274606 N 0.708
chr1.LjB17A22.60.nc Lotus japonicus chr1.LjB17A22.60.nc N 0.708
chr1.LjB17A22.80.nc Lotus japonicus chr1.LjB17A22.80.nc N 0.708
POPTR_0016s12650 Populus trichocarpa POPTR_0016s12650 N 0.702