MDP0000274606 (Malus domestica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 MDP0000274606 T258718_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000274606 MADS box 10 57

Links

Other MADS box family TFs
Other Malus domestica TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000120467 Malus domestica MDP0000120467 N 0.938
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.917
Pm030655 Prunus mume Pm030655 I 0.896
TCM_029518 Theobroma cacao TCM_029518 I 0.875
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.875
29693.m002039 Ricinus communis 29693.m002039 I 0.854
POPTR_0004s13600 Populus trichocarpa POPTR_0004s13600 N 0.833
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.833
Lus10040832.g Linum usitatissimum Lus10040832.g N 0.833
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.833
Eucgr.D00311 Eucalyptus grandis Eucgr.D00311 N 0.812
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.812
SapurV1A.0560s0040 Salix purpurea SapurV1A.0560s0040 N 0.812
SapurV1A.2238s0010 Salix purpurea SapurV1A.2238s0010 N 0.812
MTR_8g051580 Medicago truncatula MTR_8g051580 I 0.792
Cla019897 Citrullus lanatus Cla019897 N 0.792
Eucgr.D00312 Eucalyptus grandis Eucgr.D00312 N 0.792
Eucgr.D00313 Eucalyptus grandis Eucgr.D00313 N 0.792
gene14058-v1.0-hybrid Fragaria vesca gene14058-v1.0-hybrid I 0.792
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.792
Lus10016563.g Linum usitatissimum Lus10016563.g N 0.792
cassava10519.m1 Manihot esculenta cassava10519.m1 I 0.771
Cucsa.212320 Cucumis sativus Cucsa.212320 N 0.771
AGL29 Arabidopsis thaliana AT2G34440 I 0.750
AGL29 Arabidopsis lyrata fgenesh2_kg.4__1464__AT2G34440.1 I 0.750
GLYMA18G20830 Glycine max GLYMA18G20830 I 0.750
Ca_05023 Cicer arietinum Ca_05023 I 0.750
Bostr.23794s0666 Boechera stricta Bostr.23794s0666 I 0.750
Cagra.7352s0007 Capsella grandiflora Cagra.7352s0007 I 0.750
Carubv10025656m.g Capsella rubella Carubv10025656m.g I 0.750
Lus10011787.g Linum usitatissimum Lus10011787.g N 0.750
Bo4g182590 Brassica oleracea Bo4g182590 I 0.729
Bo9g142570 Brassica oleracea Bo9g142570 N 0.729
Bra021910 Brassica rapa Bra021910 I 0.729
GLYMA05G35811 Glycine max GLYMA05G35811 I 0.729
GLYMA05G35820 Glycine max GLYMA05G35820 I 0.729
GLYMA08G03820 Glycine max GLYMA08G03820 I 0.729
GLYMA08G03830 Glycine max GLYMA08G03830 I 0.729
MTR_1g047550 Medicago truncatula MTR_1g047550 I 0.729
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.729
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.729
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.729
TCM_006325 Theobroma cacao TCM_006325 N 0.729
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.729
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.729
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.729
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.729
Thhalv10017825m.g Eutrema salsugineum Thhalv10017825m.g I 0.729
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.729
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.729
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.708
AGL61 Arabidopsis thaliana AT2G24840 N 0.708
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.708
Bo5g113750 Brassica oleracea Bo5g113750 N 0.708
Bra002480 Brassica rapa Bra002480 N 0.708
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.708
GLYMA08G38880 Glycine max GLYMA08G38880 I 0.708
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.708
GSMUA_Achr8G07230_001 Musa acuminata GSMUA_Achr8G07230_001 I 0.708
GSMUA_AchrUn_randomG20290_001 Musa acuminata GSMUA_AchrUn_randomG20290_001 I 0.708
MTR_1g063160 Medicago truncatula MTR_1g063160 I 0.708
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.708
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.708
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.708
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.708
VIT_00s0386g00010 Vitis vinifera VIT_00s0386g00010 N 0.708
Ca_24185 Cicer arietinum Ca_24185 I 0.708
Cla006571 Citrullus lanatus Cla006571 N 0.708
Pm021018 Prunus mume Pm021018 N 0.708
Pm021070 Prunus mume Pm021070 N 0.708
30099.m001672 Ricinus communis 30099.m001672 N 0.708
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.708
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.708
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.708
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.708
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.708
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.708
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.708
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.708
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.708
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.708
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.708
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.708
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.708
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.708
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.708
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.708
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.708
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.708
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.708
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.708
MDP0000221590 Malus domestica MDP0000221590 N 0.708
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.708
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.708
chr3.CM0059.60.nd Lotus japonicus chr3.CM0059.60.nd N 0.708
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.708