MDP0000120467 (Malus domestica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 MDP0000120467 T258639_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000120467 MADS box 10 57

Links

Other MADS box family TFs
Other Malus domestica TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000274606 Malus domestica MDP0000274606 N 0.938
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.854
Pm030655 Prunus mume Pm030655 I 0.833
POPTR_0004s13600 Populus trichocarpa POPTR_0004s13600 N 0.812
TCM_029518 Theobroma cacao TCM_029518 I 0.812
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.812
29693.m002039 Ricinus communis 29693.m002039 I 0.792
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.792
Eucgr.D00311 Eucalyptus grandis Eucgr.D00311 N 0.792
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.792
SapurV1A.0560s0040 Salix purpurea SapurV1A.0560s0040 N 0.792
SapurV1A.2238s0010 Salix purpurea SapurV1A.2238s0010 N 0.792
MTR_8g051580 Medicago truncatula MTR_8g051580 I 0.771
cassava10519.m1 Manihot esculenta cassava10519.m1 I 0.771
Eucgr.D00312 Eucalyptus grandis Eucgr.D00312 N 0.771
Eucgr.D00313 Eucalyptus grandis Eucgr.D00313 N 0.771
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.771
Lus10040832.g Linum usitatissimum Lus10040832.g N 0.771
Cla019897 Citrullus lanatus Cla019897 N 0.750
gene14058-v1.0-hybrid Fragaria vesca gene14058-v1.0-hybrid I 0.750
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.750
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.750
GLYMA08G38880 Glycine max GLYMA08G38880 I 0.729
GLYMA18G20830 Glycine max GLYMA18G20830 I 0.729
Ca_05023 Cicer arietinum Ca_05023 I 0.729
Ca_24185 Cicer arietinum Ca_24185 I 0.729
Cucsa.212320 Cucumis sativus Cucsa.212320 N 0.729
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.729
Lus10016563.g Linum usitatissimum Lus10016563.g N 0.729
Bo9g142570 Brassica oleracea Bo9g142570 N 0.708
GLYMA05G35811 Glycine max GLYMA05G35811 I 0.708
GLYMA05G35820 Glycine max GLYMA05G35820 I 0.708
GLYMA08G03820 Glycine max GLYMA08G03820 I 0.708
GLYMA08G03830 Glycine max GLYMA08G03830 I 0.708
GSMUA_AchrUn_randomG20290_001 Musa acuminata GSMUA_AchrUn_randomG20290_001 I 0.708
MTR_1g047550 Medicago truncatula MTR_1g047550 I 0.708
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.708
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.708
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.708
PRUPE_ppa021886mg Prunus persica PRUPE_ppa021886mg N 0.708
TCM_006325 Theobroma cacao TCM_006325 N 0.708
gene07364-v1.0-hybrid Fragaria vesca gene07364-v1.0-hybrid N 0.708
Lus10035456.g Linum usitatissimum Lus10035456.g N 0.708
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.708