MDP0000221590 (Malus domestica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 MDP0000221590 T258689_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000221590 MADS box 15 62

Links

Other MADS box family TFs
Other Malus domestica TFs

237 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.854
Cla006571 Citrullus lanatus Cla006571 N 0.854
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.854
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.854
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.854
Bo5g113750 Brassica oleracea Bo5g113750 N 0.833
Bra022434 Brassica rapa Bra022434 N 0.833
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.833
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.833
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.833
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.833
Ca_04665 Cicer arietinum Ca_04665 N 0.833
30099.m001672 Ricinus communis 30099.m001672 N 0.833
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.833
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.833
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.833
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.833
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.833
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.833
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.812
AGL62 Arabidopsis thaliana AT5G60440 I 0.812
Bo1g112460 Brassica oleracea Bo1g112460 N 0.812
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.812
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.812
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.812
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.812
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.812
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.812
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.812
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.812
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.812
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.812
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.812
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.812
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.812
TCM_006323 Theobroma cacao TCM_006323 N 0.812
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.812
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.812
Ca_04659 Cicer arietinum Ca_04659 N 0.812
Ca_04660 Cicer arietinum Ca_04660 N 0.812
Pm021018 Prunus mume Pm021018 N 0.812
Pm021071 Prunus mume Pm021071 N 0.812
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.812
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.812
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.812
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.812
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.812
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.812
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.812
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.812
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.812
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.812
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.812
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.812
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.812
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.812
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.792
Bra038225 Brassica rapa Bra038225 N 0.792
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.792
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.792
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.792
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.792
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.792
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.792
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.792
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.792
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.792
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.792
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.792
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.792
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.792
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.792
Ca_04661 Cicer arietinum Ca_04661 N 0.792
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.792
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.792
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.792
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.792
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.792
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.792
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.792
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.792
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.792
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.792
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.792
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.792
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.792
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.792
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.792
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.792
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.792
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.792
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.792
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.792
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.792
MDP0000434703 Malus domestica MDP0000434703 I 0.792
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.792
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.792
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.792
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.792
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.792
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.792
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.771
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.771
AGL61 Arabidopsis thaliana AT2G24840 N 0.771
Bo9g142570 Brassica oleracea Bo9g142570 N 0.771
Bra002480 Brassica rapa Bra002480 N 0.771
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.771
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.771
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.771
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.771
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.771
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.771
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.771
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.771
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.771
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.771
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.771
Ca_04662 Cicer arietinum Ca_04662 N 0.771
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.771
mgf018529m Mimulus guttatus mgf018529m N 0.771
mgf024307m Mimulus guttatus mgf024307m N 0.771
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.771
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.771
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.771
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.771
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.771
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.771
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.771
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.771
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.771
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.771
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.771
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.771
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.771
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.771
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.771
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.771
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.771
MDP0000233925 Malus domestica MDP0000233925 N 0.771
MDP0000278770 Malus domestica MDP0000278770 N 0.771
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.771
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.771
AGL28 Arabidopsis thaliana AT1G01530 N 0.750
Bo8g099550 Brassica oleracea Bo8g099550 N 0.750
Bra007829 Brassica rapa Bra007829 N 0.750
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.750
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.750
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.750
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.750
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.750
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.750
TCM_006324 Theobroma cacao TCM_006324 N 0.750
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.750
Ca_07607 Cicer arietinum Ca_07607 N 0.750
Ca_26354 Cicer arietinum Ca_26354 N 0.750
Pm021017 Prunus mume Pm021017 N 0.750
Pm021070 Prunus mume Pm021070 N 0.750
29613.m000367 Ricinus communis 29613.m000367 N 0.750
30099.m001671 Ricinus communis 30099.m001671 N 0.750
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.750
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.750
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.750
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.750
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.750
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.750
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.750
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.750
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.750
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.750
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.750
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.750
MDP0000168914 Malus domestica MDP0000168914 N 0.750
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.750
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.750
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.750
AGL23 Arabidopsis thaliana AT1G65360 N 0.729
Bo2g024910 Brassica oleracea Bo2g024910 N 0.729
Bo4g165540 Brassica oleracea Bo4g165540 N 0.729
Bra026764 Brassica rapa Bra026764 N 0.729
Bra032057 Brassica rapa Bra032057 N 0.729
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.729
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.729
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.729
TCM_040735 Theobroma cacao TCM_040735 N 0.729
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.729
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.729
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.729
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.729
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.729
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.729
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.729
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.729
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.729
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.729
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.729
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.729
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.729
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.729
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.729
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.729
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N 0.729
LjT01D09.100.nd Lotus japonicus LjT01D09.100.nd N 0.729
Bo4g157220 Brassica oleracea Bo4g157220 N 0.708
Bra011938 Brassica rapa Bra011938 N 0.708
Bra020247 Brassica rapa Bra020247 N 0.708
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.708
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.708
PGSC0003DMG400040127 Solanum tuberosum PGSC0003DMG400040127 N 0.708
PGSC0003DMG400045239 Solanum tuberosum PGSC0003DMG400045239 N 0.708
POPTR_0007s03270 Populus trichocarpa POPTR_0007s03270 I 0.708
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.708
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.708
Solyc04g047870.1 Solanum lycopersicum Solyc04g047870.1 N 0.708
TCM_006325 Theobroma cacao TCM_006325 N 0.708
Pm016629 Prunus mume Pm016629 N 0.708
Pm030655 Prunus mume Pm030655 I 0.708
29838.m001672 Ricinus communis 29838.m001672 N 0.708
cassava21573.m1 Manihot esculenta cassava21573.m1 N 0.708
mgf022625m Mimulus guttatus mgf022625m N 0.708
mgf022790m Mimulus guttatus mgf022790m N 0.708
Aquca_015_00242 Aquilegia coerulea Aquca_015_00242 N 0.708
Aquca_015_00243 Aquilegia coerulea Aquca_015_00243 N 0.708
Aquca_040_00096 Aquilegia coerulea Aquca_040_00096 N 0.708
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.708
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.708
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.708
Gorai.012G163200 Gossypium raimondii Gorai.012G163200 N 0.708
Gorai.N026300 Gossypium raimondii Gorai.N026300 N 0.708
MDP0000274606 Malus domestica MDP0000274606 N 0.708
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.708
SapurV1A.0187s0010 Salix purpurea SapurV1A.0187s0010 I 0.708
Thhalv10000432m.g Eutrema salsugineum Thhalv10000432m.g N 0.708
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.708
chr1.LjB17A22.60.nc Lotus japonicus chr1.LjB17A22.60.nc N 0.708
chr2.CM0250.170.nc Lotus japonicus chr2.CM0250.170.nc N 0.708
LjSGA_082681.2 Lotus japonicus LjSGA_082681.2 N 0.708
LjSGA_120826.2 Lotus japonicus LjSGA_120826.2 N 0.708