CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf018529m
(
Mimulus guttatus
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
mgf018529m
T257424_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf018529m
MADS box
47
94
KIEVKNHLQVTFSKRRSGLFKKASELCTLCGVEIAIIVFSPAGKVFSF
Links
Other
MADS box
family TFs
Other
Mimulus guttatus
TFs
240 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mgf024307m
Mimulus guttatus
mgf024307m
N
1.000
PGSC0003DMG400044387
Solanum tuberosum
PGSC0003DMG400044387
N
0.979
Solyc01g106710.1
Solanum lycopersicum
Solyc01g106710.1
N
0.979
PGSC0003DMG400043633
Solanum tuberosum
PGSC0003DMG400043633
N
0.917
VIT_03s0088g00590
Vitis vinifera
VIT_03s0088g00590
N
0.896
29613.m000367
Ricinus communis
29613.m000367
N
0.896
Eucgr.H04834
Eucalyptus grandis
Eucgr.H04834
N
0.896
Gorai.006G127800
Gossypium raimondii
Gorai.006G127800
N
0.896
chr1.CM0088.830.nc
Lotus japonicus
chr1.CM0088.830.nc
N
0.896
GLYMA20G27350
Glycine max
GLYMA20G27350
N
0.875
MTR_3g080940
Medicago truncatula
MTR_3g080940
N
0.875
PRUPE_ppa017246mg
Prunus persica
PRUPE_ppa017246mg
N
0.875
TCM_040735
Theobroma cacao
TCM_040735
N
0.875
Ca_07607
Cicer arietinum
Ca_07607
N
0.875
Ca_26354
Cicer arietinum
Ca_26354
N
0.875
Pm021070
Prunus mume
Pm021070
N
0.875
MDP0000168914
Malus domestica
MDP0000168914
N
0.875
SapurV1A.0019s0700
Salix purpurea
SapurV1A.0019s0700
N
0.875
LjSGA_079719.1
Lotus japonicus
LjSGA_079719.1
N
0.875
POPTR_0009s08740
Populus trichocarpa
POPTR_0009s08740
N
0.854
VIT_03s0088g00610
Vitis vinifera
VIT_03s0088g00610
N
0.854
30099.m001671
Ricinus communis
30099.m001671
N
0.854
cassava41915.m1
Manihot esculenta
cassava41915.m1
N
0.854
Gorai.002G213500
Gossypium raimondii
Gorai.002G213500
N
0.854
LjSGA_042140.1
Lotus japonicus
LjSGA_042140.1
N
0.854
GLYMA10G40060
Glycine max
GLYMA10G40060
N
0.833
PRUPE_ppa026089mg
Prunus persica
PRUPE_ppa026089mg
N
0.833
Pm021018
Prunus mume
Pm021018
N
0.833
Lus10030663.g
Linum usitatissimum
Lus10030663.g
N
0.833
Lus10030824.g
Linum usitatissimum
Lus10030824.g
N
0.833
Thhalv10012100m.g
Eutrema salsugineum
Thhalv10012100m.g
I
0.816
Bra026764
Brassica rapa
Bra026764
N
0.812
POPTR_0008s04110
Populus trichocarpa
POPTR_0008s04110
N
0.812
Cla006571
Citrullus lanatus
Cla006571
N
0.812
cassava33542.m1
Manihot esculenta
cassava33542.m1
N
0.812
Cucsa.298560
Cucumis sativus
Cucsa.298560
N
0.812
Bostr.26833s0197
Boechera stricta
Bostr.26833s0197
N
0.812
Bostr.8705s0016
Boechera stricta
Bostr.8705s0016
N
0.812
Cagra.2519s0016
Capsella grandiflora
Cagra.2519s0016
N
0.812
Carubv10028580m.g
Capsella rubella
Carubv10028580m.g
N
0.812
Ciclev10030387m.g
Citrus clementina
Ciclev10030387m.g
N
0.812
evm.TU.supercontig_20.86
Carica papaya
evm.TU.supercontig_20.86
N
0.812
gene01788-v1.0-hybrid
Fragaria vesca
gene01788-v1.0-hybrid
I
0.812
gene01789-v1.0-hybrid
Fragaria vesca
gene01789-v1.0-hybrid
N
0.812
Gorai.005G263100
Gossypium raimondii
Gorai.005G263100
N
0.812
Lus10012449.g
Linum usitatissimum
Lus10012449.g
N
0.812
orange1.1g036705m.g
Citrus sinensis
orange1.1g036705m.g
N
0.812
Thhalv10000479m.g
Eutrema salsugineum
Thhalv10000479m.g
N
0.812
Thhalv10003338m.g
Eutrema salsugineum
Thhalv10003338m.g
N
0.812
Thhalv10022102m.g
Eutrema salsugineum
Thhalv10022102m.g
N
0.812
chr3.CM0279.290.nc
Lotus japonicus
chr3.CM0279.290.nc
N
0.812
Al_scaffold_0001_74
Arabidopsis lyrata
Al_scaffold_0001_74
N
0.792
Al_scaffold_0002_1221
Arabidopsis lyrata
Al_scaffold_0002_1221
N
0.792
AGL61
Arabidopsis lyrata
Al_scaffold_0004_541
N
0.792
AGL61
Arabidopsis thaliana
AT2G24840
N
0.792
Bo1g112460
Brassica oleracea
Bo1g112460
N
0.792
Bra022434
Brassica rapa
Bra022434
N
0.792
AGL62
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8002041
N
0.792
PGSC0003DMG400005131
Solanum tuberosum
PGSC0003DMG400005131
N
0.792
PRUPE_ppa023670mg
Prunus persica
PRUPE_ppa023670mg
N
0.792
PRUPE_ppa026127mg
Prunus persica
PRUPE_ppa026127mg
N
0.792
scaffold_302326.1
Arabidopsis lyrata
scaffold_302326.1
I
0.792
scaffold_400572.1
Arabidopsis lyrata
scaffold_400572.1
N
0.792
Solyc01g106720.1
Solanum lycopersicum
Solyc01g106720.1
N
0.792
TCM_006323
Theobroma cacao
TCM_006323
N
0.792
TCM_006324
Theobroma cacao
TCM_006324
N
0.792
VIT_03s0088g00550
Vitis vinifera
VIT_03s0088g00550
N
0.792
Pm016629
Prunus mume
Pm016629
N
0.792
Pm021071
Prunus mume
Pm021071
N
0.792
30099.m001672
Ricinus communis
30099.m001672
N
0.792
Aquca_054_00126
Aquilegia coerulea
Aquca_054_00126
N
0.792
Bostr.5325s0071
Boechera stricta
Bostr.5325s0071
N
0.792
Cagra.1004s0007
Capsella grandiflora
Cagra.1004s0007
N
0.792
Carubv10024914m.g
Capsella rubella
Carubv10024914m.g
N
0.792
Ciclev10013802m.g
Citrus clementina
Ciclev10013802m.g
N
0.792
Lus10020511.g
Linum usitatissimum
Lus10020511.g
N
0.792
orange1.1g045481m.g
Citrus sinensis
orange1.1g045481m.g
N
0.792
SapurV1A.0019s0690
Salix purpurea
SapurV1A.0019s0690
N
0.792
SapurV1A.1128s0080
Salix purpurea
SapurV1A.1128s0080
N
0.792
AT4G36590
Arabidopsis thaliana
AT4G36590
N
0.771
AGL62
Arabidopsis thaliana
AT5G60440
I
0.771
Bo4g165540
Brassica oleracea
Bo4g165540
N
0.771
Bo5g113750
Brassica oleracea
Bo5g113750
N
0.771
Bo8g099550
Brassica oleracea
Bo8g099550
N
0.771
Bra002480
Brassica rapa
Bra002480
N
0.771
Bra007829
Brassica rapa
Bra007829
N
0.771
Bra038225
Brassica rapa
Bra038225
N
0.771
MTR_1g075600
Medicago truncatula
MTR_1g075600
N
0.771
MTR_1g077360
Medicago truncatula
MTR_1g077360
N
0.771
MTR_3g052920
Medicago truncatula
MTR_3g052920
N
0.771
POPTR_0009s08750
Populus trichocarpa
POPTR_0009s08750
N
0.771
POPTR_0017s07460
Populus trichocarpa
POPTR_0017s07460
N
0.771
Solyc01g106730.1
Solanum lycopersicum
Solyc01g106730.1
N
0.771
VIT_03s0088g00510
Vitis vinifera
VIT_03s0088g00510
N
0.771
Ca_04661
Cicer arietinum
Ca_04661
N
0.771
Aquca_041_00050
Aquilegia coerulea
Aquca_041_00050
N
0.771
Bostr.7867s1515
Boechera stricta
Bostr.7867s1515
N
0.771
Ciclev10030142m.g
Citrus clementina
Ciclev10030142m.g
N
0.771
evm.TU.contig_27313
Carica papaya
evm.TU.contig_27313
N
0.771
evm.TU.contig_35713
Carica papaya
evm.TU.contig_35713
N
0.771
evm.TU.contig_35751
Carica papaya
evm.TU.contig_35751
N
0.771
evm.TU.contig_37271
Carica papaya
evm.TU.contig_37271
N
0.771
evm.TU.contig_41623
Carica papaya
evm.TU.contig_41623
N
0.771
evm.TU.supercontig_106.18
Carica papaya
evm.TU.supercontig_106.18
N
0.771
evm.TU.supercontig_106.19
Carica papaya
evm.TU.supercontig_106.19
N
0.771
evm.TU.supercontig_347.11
Carica papaya
evm.TU.supercontig_347.11
N
0.771
evm.TU.supercontig_347.7
Carica papaya
evm.TU.supercontig_347.7
N
0.771
evm.TU.supercontig_348.8
Carica papaya
evm.TU.supercontig_348.8
N
0.771
evm.TU.supercontig_625.4
Carica papaya
evm.TU.supercontig_625.4
N
0.771
evm.TU.supercontig_654.4
Carica papaya
evm.TU.supercontig_654.4
N
0.771
evm.TU.supercontig_654.6
Carica papaya
evm.TU.supercontig_654.6
N
0.771
MDP0000221590
Malus domestica
MDP0000221590
N
0.771
MDP0000434703
Malus domestica
MDP0000434703
I
0.771
orange1.1g039654m.g
Citrus sinensis
orange1.1g039654m.g
N
0.771
SapurV1A.1313s0050
Salix purpurea
SapurV1A.1313s0050
N
0.771
Thhalv10003426m.g
Eutrema salsugineum
Thhalv10003426m.g
N
0.771
chr5.LjT39E05.40.nd
Lotus japonicus
chr5.LjT39E05.40.nd
N
0.771
AGL28
Arabidopsis thaliana
AT1G01530
N
0.750
Bo9g142570
Brassica oleracea
Bo9g142570
N
0.750
Bra032057
Brassica rapa
Bra032057
N
0.750
fgenesh1_pm.C_scaffold_7000337
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_7000337
N
0.750
GLYMA20G27320
Glycine max
GLYMA20G27320
N
0.750
GLYMA20G27341
Glycine max
GLYMA20G27341
N
0.750
MTR_1g108500
Medicago truncatula
MTR_1g108500
N
0.750
MTR_1g108510
Medicago truncatula
MTR_1g108510
N
0.750
MTR_2g030740
Medicago truncatula
MTR_2g030740
N
0.750
MTR_2g085250
Medicago truncatula
MTR_2g085250
N
0.750
MTR_2g085280
Medicago truncatula
MTR_2g085280
N
0.750
MTR_2g093190
Medicago truncatula
MTR_2g093190
N
0.750
MTR_3g030770
Medicago truncatula
MTR_3g030770
N
0.750
PGSC0003DMG400036160
Solanum tuberosum
PGSC0003DMG400036160
N
0.750
PGSC0003DMG400041035
Solanum tuberosum
PGSC0003DMG400041035
N
0.750
POPTR_0007s03430
Populus trichocarpa
POPTR_0007s03430
N
0.750
VIT_01s0010g01500
Vitis vinifera
VIT_01s0010g01500
N
0.750
VIT_03s0088g00600
Vitis vinifera
VIT_03s0088g00600
N
0.750
Ca_04659
Cicer arietinum
Ca_04659
N
0.750
Ca_04660
Cicer arietinum
Ca_04660
N
0.750
Ca_04665
Cicer arietinum
Ca_04665
N
0.750
cassava21387.m1
Manihot esculenta
cassava21387.m1
N
0.750
Aquca_015_00242
Aquilegia coerulea
Aquca_015_00242
N
0.750
Aquca_015_00243
Aquilegia coerulea
Aquca_015_00243
N
0.750
Aquca_040_00096
Aquilegia coerulea
Aquca_040_00096
N
0.750
Cagra.1968s0094
Capsella grandiflora
Cagra.1968s0094
N
0.750
Carubv10010156m.g
Capsella rubella
Carubv10010156m.g
N
0.750
Eucgr.G01185
Eucalyptus grandis
Eucgr.G01185
N
0.750
evm.TU.contig_24748.4
Carica papaya
evm.TU.contig_24748.4
N
0.750
evm.TU.contig_26687.3
Carica papaya
evm.TU.contig_26687.3
N
0.750
evm.TU.contig_28241.1
Carica papaya
evm.TU.contig_28241.1
N
0.750
evm.TU.contig_30114.1
Carica papaya
evm.TU.contig_30114.1
N
0.750
evm.TU.contig_30689
Carica papaya
evm.TU.contig_30689
N
0.750
evm.TU.contig_30908.1
Carica papaya
evm.TU.contig_30908.1
N
0.750
evm.TU.contig_33038
Carica papaya
evm.TU.contig_33038
N
0.750
evm.TU.supercontig_106.20
Carica papaya
evm.TU.supercontig_106.20
N
0.750
evm.TU.supercontig_1455.2
Carica papaya
evm.TU.supercontig_1455.2
N
0.750
evm.TU.supercontig_348.3
Carica papaya
evm.TU.supercontig_348.3
N
0.750
evm.TU.supercontig_348.4
Carica papaya
evm.TU.supercontig_348.4
N
0.750
evm.TU.supercontig_505.2
Carica papaya
evm.TU.supercontig_505.2
N
0.750
evm.TU.supercontig_505.4
Carica papaya
evm.TU.supercontig_505.4
N
0.750
evm.TU.supercontig_54.68
Carica papaya
evm.TU.supercontig_54.68
N
0.750
evm.TU.supercontig_695.1
Carica papaya
evm.TU.supercontig_695.1
N
0.750
evm.TU.supercontig_695.7
Carica papaya
evm.TU.supercontig_695.7
N
0.750
evm.TU.supercontig_758.2
Carica papaya
evm.TU.supercontig_758.2
N
0.750
evm.TU.supercontig_758.4
Carica papaya
evm.TU.supercontig_758.4
N
0.750
evm.TU.supercontig_851.1
Carica papaya
evm.TU.supercontig_851.1
N
0.750
MDP0000233925
Malus domestica
MDP0000233925
N
0.750
MDP0000278770
Malus domestica
MDP0000278770
N
0.750
Thhalv10015908m.g
Eutrema salsugineum
Thhalv10015908m.g
N
0.750
Thhalv10017754m.g
Eutrema salsugineum
Thhalv10017754m.g
N
0.750
Thhalv10027307m.g
Eutrema salsugineum
Thhalv10027307m.g
N
0.750
chr2.CM0904.120.nd
Lotus japonicus
chr2.CM0904.120.nd
N
0.750
chr5.LjT25B19.190.nd
Lotus japonicus
chr5.LjT25B19.190.nd
N
0.750
LjSGA_025167.1
Lotus japonicus
LjSGA_025167.1
N
0.750
AGL23
Arabidopsis thaliana
AT1G65360
N
0.729
Bo4g157220
Brassica oleracea
Bo4g157220
N
0.729
Bra011938
Brassica rapa
Bra011938
N
0.729
Bra035685
Brassica rapa
Bra035685
N
0.729
GLYMA10G40070
Glycine max
GLYMA10G40070
N
0.729
GLYMA20G27330
Glycine max
GLYMA20G27330
N
0.729
MTR_1g012570
Medicago truncatula
MTR_1g012570
N
0.729
MTR_1g105910
Medicago truncatula
MTR_1g105910
N
0.729
MTR_1g105920
Medicago truncatula
MTR_1g105920
N
0.729
MTR_3g052870
Medicago truncatula
MTR_3g052870
N
0.729
MTR_5g045560
Medicago truncatula
MTR_5g045560
N
0.729
MTR_5g055100
Medicago truncatula
MTR_5g055100
N
0.729
MTR_8g043650
Medicago truncatula
MTR_8g043650
N
0.729
PGSC0003DMG400039595
Solanum tuberosum
PGSC0003DMG400039595
N
0.729
VIT_01s0010g01530
Vitis vinifera
VIT_01s0010g01530
N
0.729
Ca_04662
Cicer arietinum
Ca_04662
N
0.729
mgf021403m
Mimulus guttatus
mgf021403m
N
0.729
Aquca_005_00477
Aquilegia coerulea
Aquca_005_00477
N
0.729
Cagra.1695s0023
Capsella grandiflora
Cagra.1695s0023
N
0.729
Carubv10007644m.g
Capsella rubella
Carubv10007644m.g
N
0.729
Ciclev10030327m.g
Citrus clementina
Ciclev10030327m.g
N
0.729
evm.TU.contig_30005.4
Carica papaya
evm.TU.contig_30005.4
N
0.729
evm.TU.contig_35157.1
Carica papaya
evm.TU.contig_35157.1
N
0.729
evm.TU.supercontig_1259.1
Carica papaya
evm.TU.supercontig_1259.1
N
0.729
evm.TU.supercontig_347.8
Carica papaya
evm.TU.supercontig_347.8
N
0.729
evm.TU.supercontig_439.7
Carica papaya
evm.TU.supercontig_439.7
N
0.729
evm.TU.supercontig_695.5
Carica papaya
evm.TU.supercontig_695.5
N
0.729
orange1.1g045249m.g
Citrus sinensis
orange1.1g045249m.g
N
0.729
SapurV1A.0808s0160
Salix purpurea
SapurV1A.0808s0160
N
0.729
Thhalv10000432m.g
Eutrema salsugineum
Thhalv10000432m.g
N
0.729
chr2.CM0250.170.nc
Lotus japonicus
chr2.CM0250.170.nc
N
0.729
Bo4g070340
Brassica oleracea
Bo4g070340
N
0.723
Bo2g024870
Brassica oleracea
Bo2g024870
N
0.708
Bo2g024910
Brassica oleracea
Bo2g024910
N
0.708
Bra020247
Brassica rapa
Bra020247
N
0.708
F775_04223
Aegilops tauschii
F775_04223
I
0.708
GLYMA10G40080
Glycine max
GLYMA10G40080
N
0.708
GLYMA13G39016
Glycine max
GLYMA13G39016
N
0.708
MTR_1g108580
Medicago truncatula
MTR_1g108580
N
0.708
MTR_5g053390
Medicago truncatula
MTR_5g053390
N
0.708
MTR_8g086290
Medicago truncatula
MTR_8g086290
N
0.708
POPTR_0004s13600
Populus trichocarpa
POPTR_0004s13600
N
0.708
TCM_006325
Theobroma cacao
TCM_006325
N
0.708
TRAES3BF106100060CFD_g
Triticum aestivum
TRAES3BF106100060CFD_g
I
0.708
Ca_04658
Cicer arietinum
Ca_04658
N
0.708
Cla010744
Citrullus lanatus
Cla010744
N
0.708
Pm002317
Prunus mume
Pm002317
N
0.708
cassava21573.m1
Manihot esculenta
cassava21573.m1
N
0.708
cassava8711.m1
Manihot esculenta
cassava8711.m1
N
0.708
mgf017842m
Mimulus guttatus
mgf017842m
N
0.708
mgf020533m
Mimulus guttatus
mgf020533m
N
0.708
mgf022147m
Mimulus guttatus
mgf022147m
N
0.708
mgf022403m
Mimulus guttatus
mgf022403m
N
0.708
mgf023207m
Mimulus guttatus
mgf023207m
N
0.708
mgf024490m
Mimulus guttatus
mgf024490m
N
0.708
mgf025566m
Mimulus guttatus
mgf025566m
N
0.708
Ciclev10032637m.g
Citrus clementina
Ciclev10032637m.g
N
0.708
Eucgr.I02506
Eucalyptus grandis
Eucgr.I02506
N
0.708
evm.TU.contig_24748.5
Carica papaya
evm.TU.contig_24748.5
N
0.708
evm.TU.contig_27553.3
Carica papaya
evm.TU.contig_27553.3
N
0.708
evm.TU.supercontig_20.85
Carica papaya
evm.TU.supercontig_20.85
N
0.708
evm.TU.supercontig_347.2
Carica papaya
evm.TU.supercontig_347.2
N
0.708
evm.TU.supercontig_505.6
Carica papaya
evm.TU.supercontig_505.6
N
0.708
evm.TU.supercontig_758.1
Carica papaya
evm.TU.supercontig_758.1
N
0.708
gene07364-v1.0-hybrid
Fragaria vesca
gene07364-v1.0-hybrid
N
0.708
Gorai.012G163200
Gossypium raimondii
Gorai.012G163200
N
0.708
Gorai.N026300
Gossypium raimondii
Gorai.N026300
N
0.708
LjSGA_028458.1.1
Lotus japonicus
LjSGA_028458.1.1
N
0.708