MTR_1g108580 (Medicago truncatula)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 MTR_1g108580 T254723_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AES62814 MADS box 17 64

Links

Other MADS box family TFs
Other Medicago truncatula TFs

185 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.896
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.896
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.875
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.875
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.875
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.875
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.875
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.875
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.875
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.875
Ca_04662 Cicer arietinum Ca_04662 N 0.875
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.854
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.854
Ca_04665 Cicer arietinum Ca_04665 N 0.854
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.833
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.833
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.833
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.833
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.833
AGL62 Arabidopsis thaliana AT5G60440 I 0.812
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.812
MTR_0121s0100 Medicago truncatula MTR_0121s0100 N 0.812
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.812
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.812
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.812
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.812
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.812
Ca_04659 Cicer arietinum Ca_04659 N 0.812
Ca_04660 Cicer arietinum Ca_04660 N 0.812
Ca_04661 Cicer arietinum Ca_04661 N 0.812
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.795
Bo9g142570 Brassica oleracea Bo9g142570 N 0.792
Bra002480 Brassica rapa Bra002480 N 0.792
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.792
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.792
MTR_0121s0080 Medicago truncatula MTR_0121s0080 N 0.792
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.792
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.792
Pm021071 Prunus mume Pm021071 N 0.792
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.792
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.792
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.792
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.792
MDP0000221590 Malus domestica MDP0000221590 N 0.792
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.792
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.771
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.771
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.771
MTR_1g075570 Medicago truncatula MTR_1g075570 N 0.771
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.771
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.771
TCM_040735 Theobroma cacao TCM_040735 N 0.771
Cla006571 Citrullus lanatus Cla006571 N 0.771
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.771
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.771
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.771
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.771
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.771
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.771
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.771
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.771
MDP0000434703 Malus domestica MDP0000434703 I 0.771
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.771
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.771
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.771
Bra020247 Brassica rapa Bra020247 N 0.750
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.750
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.750
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.750
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.750
TCM_006323 Theobroma cacao TCM_006323 N 0.750
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.750
30099.m001672 Ricinus communis 30099.m001672 N 0.750
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.750
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.750
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.750
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.750
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.750
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.750
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.750
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.750
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.750
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.750
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.750
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.750
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.750
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.750
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.750
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.750
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.750
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.750
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.750
MDP0000233925 Malus domestica MDP0000233925 N 0.750
MDP0000278770 Malus domestica MDP0000278770 N 0.750
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.750
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.750
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.750
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.750
chr2.CM0250.170.nc Lotus japonicus chr2.CM0250.170.nc N 0.750
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.750
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.750
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.750
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.750
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.737
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.729
AGL28 Arabidopsis thaliana AT1G01530 N 0.729
AGL23 Arabidopsis thaliana AT1G65360 N 0.729
Bo1g112460 Brassica oleracea Bo1g112460 N 0.729
Bo2g024910 Brassica oleracea Bo2g024910 N 0.729
Bo5g113750 Brassica oleracea Bo5g113750 N 0.729
Bra020242 Brassica rapa Bra020242 N 0.729
Bra022434 Brassica rapa Bra022434 N 0.729
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.729
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.729
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.729
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.729
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.729
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.729
29613.m000367 Ricinus communis 29613.m000367 N 0.729
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.729
mgf022790m Mimulus guttatus mgf022790m N 0.729
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.729
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.729
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.729
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.729
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.729
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.729
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.729
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.729
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.729
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.729
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.729
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.729
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.729
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.729
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.729
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.729
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.729
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.729
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.729
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.729
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.729
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.729
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.729
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.729
Bo2g024870 Brassica oleracea Bo2g024870 N 0.708
Bo2g024900 Brassica oleracea Bo2g024900 N 0.708
Bra038225 Brassica rapa Bra038225 N 0.708
GLYMA10G10610 Glycine max GLYMA10G10610 N 0.708
GLYMA10G11450 Glycine max GLYMA10G11450 N 0.708
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.708
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.708
MTR_4g036915 Medicago truncatula MTR_4g036915 I 0.708
MTR_7g028448 Medicago truncatula MTR_7g028448 I 0.708
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.708
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.708
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.708
Solyc01g060310.1 Solanum lycopersicum Solyc01g060310.1 N 0.708
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.708
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.708
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.708
Ca_07607 Cicer arietinum Ca_07607 N 0.708
Ca_26354 Cicer arietinum Ca_26354 N 0.708
Pm021018 Prunus mume Pm021018 N 0.708
Pm021070 Prunus mume Pm021070 N 0.708
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.708
mgf018529m Mimulus guttatus mgf018529m N 0.708
mgf024307m Mimulus guttatus mgf024307m N 0.708
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.708
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.708
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.708
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.708
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.708
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.708
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.708
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.708
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.708
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.708
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.708
Thhalv10000432m.g Eutrema salsugineum Thhalv10000432m.g N 0.708
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.708
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.708
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.708
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.708
Solyc01g060300.1 Solanum lycopersicum Solyc01g060300.1 N 0.702