CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf022790m
(
Mimulus guttatus
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
mgf022790m
T257454_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf022790m
MADS box
22
69
KMENESNLQVTFSKRRVGLFKKASELCTLTGSKAAVVVFSPGGKAHSF
Links
Other
MADS box
family TFs
Other
Mimulus guttatus
TFs
157 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo9g142570
Brassica oleracea
Bo9g142570
N
0.833
Bra002480
Brassica rapa
Bra002480
N
0.812
MTR_1g108510
Medicago truncatula
MTR_1g108510
N
0.812
MTR_3g030770
Medicago truncatula
MTR_3g030770
N
0.812
AT4G36590
Arabidopsis thaliana
AT4G36590
N
0.792
AGL62
Arabidopsis thaliana
AT5G60440
I
0.792
AGL62
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8002041
N
0.792
GLYMA10G40080
Glycine max
GLYMA10G40080
N
0.792
GLYMA20G27330
Glycine max
GLYMA20G27330
N
0.792
MTR_1g105910
Medicago truncatula
MTR_1g105910
N
0.792
MTR_1g105920
Medicago truncatula
MTR_1g105920
N
0.792
MTR_3g052870
Medicago truncatula
MTR_3g052870
N
0.792
MTR_8g043650
Medicago truncatula
MTR_8g043650
N
0.792
Ca_04665
Cicer arietinum
Ca_04665
N
0.792
GLYMA20G27320
Glycine max
GLYMA20G27320
N
0.771
GLYMA20G27341
Glycine max
GLYMA20G27341
N
0.771
MTR_2g093190
Medicago truncatula
MTR_2g093190
N
0.771
PRUPE_ppa026127mg
Prunus persica
PRUPE_ppa026127mg
N
0.771
Solyc01g106730.1
Solanum lycopersicum
Solyc01g106730.1
N
0.771
VIT_03s0088g00550
Vitis vinifera
VIT_03s0088g00550
N
0.771
Ca_04662
Cicer arietinum
Ca_04662
N
0.771
Cla006571
Citrullus lanatus
Cla006571
N
0.771
Pm021071
Prunus mume
Pm021071
N
0.771
cassava33542.m1
Manihot esculenta
cassava33542.m1
N
0.771
Cucsa.298560
Cucumis sativus
Cucsa.298560
N
0.771
Bostr.26833s0197
Boechera stricta
Bostr.26833s0197
N
0.771
Bostr.7867s1515
Boechera stricta
Bostr.7867s1515
N
0.771
Cagra.2519s0016
Capsella grandiflora
Cagra.2519s0016
N
0.771
Carubv10028580m.g
Capsella rubella
Carubv10028580m.g
N
0.771
Ciclev10030142m.g
Citrus clementina
Ciclev10030142m.g
N
0.771
Eucgr.I02506
Eucalyptus grandis
Eucgr.I02506
N
0.771
evm.TU.supercontig_106.18
Carica papaya
evm.TU.supercontig_106.18
N
0.771
evm.TU.supercontig_505.4
Carica papaya
evm.TU.supercontig_505.4
N
0.771
orange1.1g039654m.g
Citrus sinensis
orange1.1g039654m.g
N
0.771
chr3.CM0279.290.nc
Lotus japonicus
chr3.CM0279.290.nc
N
0.771
Al_scaffold_0001_74
Arabidopsis lyrata
Al_scaffold_0001_74
N
0.750
AGL28
Arabidopsis thaliana
AT1G01530
N
0.750
Bo1g112460
Brassica oleracea
Bo1g112460
N
0.750
Bo5g113750
Brassica oleracea
Bo5g113750
N
0.750
Bra022434
Brassica rapa
Bra022434
N
0.750
fgenesh1_pm.C_scaffold_7000337
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_7000337
N
0.750
GLYMA10G40070
Glycine max
GLYMA10G40070
N
0.750
GLYMA13G39016
Glycine max
GLYMA13G39016
N
0.750
MTR_1g012570
Medicago truncatula
MTR_1g012570
N
0.750
MTR_1g075600
Medicago truncatula
MTR_1g075600
N
0.750
MTR_1g077360
Medicago truncatula
MTR_1g077360
N
0.750
MTR_1g105905
Medicago truncatula
MTR_1g105905
N
0.750
MTR_2g030740
Medicago truncatula
MTR_2g030740
N
0.750
MTR_3g052920
Medicago truncatula
MTR_3g052920
N
0.750
MTR_5g045560
Medicago truncatula
MTR_5g045560
N
0.750
PGSC0003DMG400005131
Solanum tuberosum
PGSC0003DMG400005131
N
0.750
Solyc01g106720.1
Solanum lycopersicum
Solyc01g106720.1
N
0.750
TCM_006323
Theobroma cacao
TCM_006323
N
0.750
VIT_03s0088g00510
Vitis vinifera
VIT_03s0088g00510
N
0.750
VIT_03s0088g00600
Vitis vinifera
VIT_03s0088g00600
N
0.750
Ca_04659
Cicer arietinum
Ca_04659
N
0.750
Ca_04660
Cicer arietinum
Ca_04660
N
0.750
30099.m001672
Ricinus communis
30099.m001672
N
0.750
evm.TU.contig_28241.1
Carica papaya
evm.TU.contig_28241.1
N
0.750
evm.TU.contig_35713
Carica papaya
evm.TU.contig_35713
N
0.750
evm.TU.contig_35751
Carica papaya
evm.TU.contig_35751
N
0.750
evm.TU.contig_37271
Carica papaya
evm.TU.contig_37271
N
0.750
evm.TU.contig_41623
Carica papaya
evm.TU.contig_41623
N
0.750
evm.TU.contig_46312
Carica papaya
evm.TU.contig_46312
N
0.750
evm.TU.supercontig_106.19
Carica papaya
evm.TU.supercontig_106.19
N
0.750
evm.TU.supercontig_347.7
Carica papaya
evm.TU.supercontig_347.7
N
0.750
evm.TU.supercontig_625.4
Carica papaya
evm.TU.supercontig_625.4
N
0.750
evm.TU.supercontig_654.6
Carica papaya
evm.TU.supercontig_654.6
N
0.750
evm.TU.supercontig_695.5
Carica papaya
evm.TU.supercontig_695.5
N
0.750
gene01789-v1.0-hybrid
Fragaria vesca
gene01789-v1.0-hybrid
N
0.750
MDP0000434703
Malus domestica
MDP0000434703
I
0.750
Thhalv10022102m.g
Eutrema salsugineum
Thhalv10022102m.g
N
0.750
Thhalv10027307m.g
Eutrema salsugineum
Thhalv10027307m.g
N
0.750
chr2.CM0904.120.nd
Lotus japonicus
chr2.CM0904.120.nd
N
0.750
chr5.LjT39E05.40.nd
Lotus japonicus
chr5.LjT39E05.40.nd
N
0.750
Bra038225
Brassica rapa
Bra038225
N
0.729
MTR_0121s0100
Medicago truncatula
MTR_0121s0100
N
0.729
MTR_1g108580
Medicago truncatula
MTR_1g108580
N
0.729
MTR_2g085250
Medicago truncatula
MTR_2g085250
N
0.729
MTR_2g085280
Medicago truncatula
MTR_2g085280
N
0.729
MTR_5g055100
Medicago truncatula
MTR_5g055100
N
0.729
PRUPE_ppa022494mg
Prunus persica
PRUPE_ppa022494mg
N
0.729
PRUPE_ppa026089mg
Prunus persica
PRUPE_ppa026089mg
N
0.729
VIT_01s0010g01500
Vitis vinifera
VIT_01s0010g01500
N
0.729
VIT_01s0010g01530
Vitis vinifera
VIT_01s0010g01530
N
0.729
Pm021017
Prunus mume
Pm021017
N
0.729
Pm021018
Prunus mume
Pm021018
N
0.729
mgf022147m
Mimulus guttatus
mgf022147m
N
0.729
Bostr.5325s0071
Boechera stricta
Bostr.5325s0071
N
0.729
evm.TU.contig_24748.4
Carica papaya
evm.TU.contig_24748.4
N
0.729
evm.TU.contig_26687.3
Carica papaya
evm.TU.contig_26687.3
N
0.729
evm.TU.contig_30005.4
Carica papaya
evm.TU.contig_30005.4
N
0.729
evm.TU.contig_30114.1
Carica papaya
evm.TU.contig_30114.1
N
0.729
evm.TU.contig_30908.1
Carica papaya
evm.TU.contig_30908.1
N
0.729
evm.TU.contig_33038
Carica papaya
evm.TU.contig_33038
N
0.729
evm.TU.supercontig_106.20
Carica papaya
evm.TU.supercontig_106.20
N
0.729
evm.TU.supercontig_1455.2
Carica papaya
evm.TU.supercontig_1455.2
N
0.729
evm.TU.supercontig_347.11
Carica papaya
evm.TU.supercontig_347.11
N
0.729
evm.TU.supercontig_348.4
Carica papaya
evm.TU.supercontig_348.4
N
0.729
evm.TU.supercontig_348.8
Carica papaya
evm.TU.supercontig_348.8
N
0.729
evm.TU.supercontig_439.7
Carica papaya
evm.TU.supercontig_439.7
N
0.729
evm.TU.supercontig_505.2
Carica papaya
evm.TU.supercontig_505.2
N
0.729
evm.TU.supercontig_54.68
Carica papaya
evm.TU.supercontig_54.68
N
0.729
evm.TU.supercontig_654.4
Carica papaya
evm.TU.supercontig_654.4
N
0.729
evm.TU.supercontig_695.1
Carica papaya
evm.TU.supercontig_695.1
N
0.729
evm.TU.supercontig_695.7
Carica papaya
evm.TU.supercontig_695.7
N
0.729
evm.TU.supercontig_758.1
Carica papaya
evm.TU.supercontig_758.1
N
0.729
evm.TU.supercontig_758.2
Carica papaya
evm.TU.supercontig_758.2
N
0.729
evm.TU.supercontig_758.4
Carica papaya
evm.TU.supercontig_758.4
N
0.729
Gorai.002G213500
Gossypium raimondii
Gorai.002G213500
N
0.729
Gorai.005G263100
Gossypium raimondii
Gorai.005G263100
N
0.729
Lus10020511.g
Linum usitatissimum
Lus10020511.g
N
0.729
Lus10030663.g
Linum usitatissimum
Lus10030663.g
N
0.729
MDP0000233925
Malus domestica
MDP0000233925
N
0.729
MDP0000278770
Malus domestica
MDP0000278770
N
0.729
SapurV1A.0019s0690
Salix purpurea
SapurV1A.0019s0690
N
0.729
Thhalv10003426m.g
Eutrema salsugineum
Thhalv10003426m.g
N
0.729
Thhalv10015908m.g
Eutrema salsugineum
Thhalv10015908m.g
N
0.729
LjSGA_025167.1
Lotus japonicus
LjSGA_025167.1
N
0.729
Al_scaffold_0002_1221
Arabidopsis lyrata
Al_scaffold_0002_1221
N
0.708
AGL23
Arabidopsis thaliana
AT1G65360
N
0.708
Bra011938
Brassica rapa
Bra011938
N
0.708
GLYMA10G40060
Glycine max
GLYMA10G40060
N
0.708
GLYMA20G27350
Glycine max
GLYMA20G27350
N
0.708
MTR_3g080940
Medicago truncatula
MTR_3g080940
N
0.708
POPTR_0009s08750
Populus trichocarpa
POPTR_0009s08750
N
0.708
POPTR_0017s07460
Populus trichocarpa
POPTR_0017s07460
N
0.708
PRUPE_ppa017246mg
Prunus persica
PRUPE_ppa017246mg
N
0.708
scaffold_302326.1
Arabidopsis lyrata
scaffold_302326.1
I
0.708
Ca_04661
Cicer arietinum
Ca_04661
N
0.708
Ca_07607
Cicer arietinum
Ca_07607
N
0.708
Ca_26354
Cicer arietinum
Ca_26354
N
0.708
Pm021070
Prunus mume
Pm021070
N
0.708
29613.m000367
Ricinus communis
29613.m000367
N
0.708
Cagra.1695s0023
Capsella grandiflora
Cagra.1695s0023
N
0.708
Cagra.1968s0094
Capsella grandiflora
Cagra.1968s0094
N
0.708
Carubv10007644m.g
Capsella rubella
Carubv10007644m.g
N
0.708
Carubv10010156m.g
Capsella rubella
Carubv10010156m.g
N
0.708
evm.TU.contig_24748.5
Carica papaya
evm.TU.contig_24748.5
N
0.708
evm.TU.contig_27553.3
Carica papaya
evm.TU.contig_27553.3
N
0.708
evm.TU.contig_30689
Carica papaya
evm.TU.contig_30689
N
0.708
evm.TU.contig_35157.1
Carica papaya
evm.TU.contig_35157.1
N
0.708
evm.TU.contig_37082
Carica papaya
evm.TU.contig_37082
N
0.708
evm.TU.supercontig_347.10
Carica papaya
evm.TU.supercontig_347.10
N
0.708
evm.TU.supercontig_347.2
Carica papaya
evm.TU.supercontig_347.2
N
0.708
evm.TU.supercontig_347.8
Carica papaya
evm.TU.supercontig_347.8
N
0.708
evm.TU.supercontig_505.5
Carica papaya
evm.TU.supercontig_505.5
N
0.708
evm.TU.supercontig_654.5
Carica papaya
evm.TU.supercontig_654.5
N
0.708
evm.TU.supercontig_851.1
Carica papaya
evm.TU.supercontig_851.1
N
0.708
Lus10012449.g
Linum usitatissimum
Lus10012449.g
N
0.708
Lus10030824.g
Linum usitatissimum
Lus10030824.g
N
0.708
MDP0000221590
Malus domestica
MDP0000221590
N
0.708
SapurV1A.1313s0050
Salix purpurea
SapurV1A.1313s0050
N
0.708
Thhalv10017754m.g
Eutrema salsugineum
Thhalv10017754m.g
N
0.708
LjSGA_079719.1
Lotus japonicus
LjSGA_079719.1
N
0.708
Bo4g070340
Brassica oleracea
Bo4g070340
N
0.702
evm.TU.contig_37489
Carica papaya
evm.TU.contig_37489
N
0.700