evm.TU.contig_37489 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_37489 T258106_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_37489.1 MADS box 15 34

Links

Other MADS box family TFs
Other Carica papaya TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.850
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.850
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.850
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.850
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.850
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.850
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.800
Pm021017 Prunus mume Pm021017 N 0.800
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.800
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.800
evm.TU.supercontig_106.21 Carica papaya evm.TU.supercontig_106.21 N 0.800
evm.TU.supercontig_2593.1 Carica papaya evm.TU.supercontig_2593.1 N 0.800
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.800
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.800
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.750
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.750
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.750
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.750
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.750
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.750
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.750
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.750
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.750
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.750
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.750
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.750
Ca_04659 Cicer arietinum Ca_04659 N 0.750
Ca_04660 Cicer arietinum Ca_04660 N 0.750
Ca_04661 Cicer arietinum Ca_04661 N 0.750
Ca_04665 Cicer arietinum Ca_04665 N 0.750
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.750
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.750
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.750
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.750
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.750
evm.TU.contig_31904 Carica papaya evm.TU.contig_31904 N 0.750
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.750
evm.TU.contig_35510 Carica papaya evm.TU.contig_35510 N 0.750
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.750
evm.TU.contig_36403 Carica papaya evm.TU.contig_36403 N 0.750
evm.TU.contig_37107 Carica papaya evm.TU.contig_37107 N 0.750
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.750
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.750
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.750
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.750
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.750
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.750
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.750
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.750
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.750
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.750
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.750
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.750
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.750
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.750
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.750
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.750
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.750
evm.TU.supercontig_695.8 Carica papaya evm.TU.supercontig_695.8 N 0.750
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.750
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.750
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.700
AGL28 Arabidopsis thaliana AT1G01530 N 0.700
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.700
AGL62 Arabidopsis thaliana AT5G60440 I 0.700
Bo1g112460 Brassica oleracea Bo1g112460 N 0.700
Bo5g113750 Brassica oleracea Bo5g113750 N 0.700
Bo9g142570 Brassica oleracea Bo9g142570 N 0.700
Bra002480 Brassica rapa Bra002480 N 0.700
Bra022434 Brassica rapa Bra022434 N 0.700
GLYMA02G35080 Glycine max GLYMA02G35080 N 0.700
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.700
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.700
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.700
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.700
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.700
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.700
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.700
Solyc01g060310.1 Solanum lycopersicum Solyc01g060310.1 N 0.700
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.700
TCM_006323 Theobroma cacao TCM_006323 N 0.700
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.700
Ca_04662 Cicer arietinum Ca_04662 N 0.700
Cla006571 Citrullus lanatus Cla006571 N 0.700
Pm021071 Prunus mume Pm021071 N 0.700
30099.m001672 Ricinus communis 30099.m001672 N 0.700
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.700
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.700
mgf022790m Mimulus guttatus mgf022790m N 0.700
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.700
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.700
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.700
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.700
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.700
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.700
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.700
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.700
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.700
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.700
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.700
evm.TU.contig_38552 Carica papaya evm.TU.contig_38552 N 0.700
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.700
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.700
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.700
evm.TU.supercontig_695.6 Carica papaya evm.TU.supercontig_695.6 N 0.700
evm.TU.supercontig_900.5 Carica papaya evm.TU.supercontig_900.5 N 0.700
MDP0000233925 Malus domestica MDP0000233925 N 0.700
MDP0000278770 Malus domestica MDP0000278770 N 0.700
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.700
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.700
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.700
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.700