evm.TU.supercontig_20.85 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.supercontig_20.85 T258198_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_20.85 MADS box 27 74

Links

Other MADS box family TFs
Other Carica papaya TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_006325 Theobroma cacao TCM_006325 N 0.729
Cla010744 Citrullus lanatus Cla010744 N 0.729
Cucsa.342610 Cucumis sativus Cucsa.342610 N 0.729
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.729
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.729
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.729
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.711
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.708
AGL61 Arabidopsis thaliana AT2G24840 N 0.708
Bo5g113750 Brassica oleracea Bo5g113750 N 0.708
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.708
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.708
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.708
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.708
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.708
Cla006571 Citrullus lanatus Cla006571 N 0.708
Pm021018 Prunus mume Pm021018 N 0.708
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.708
mgf018529m Mimulus guttatus mgf018529m N 0.708
mgf024307m Mimulus guttatus mgf024307m N 0.708
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.708
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.708
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.708
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.708
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.708
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.708
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.708
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.708
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.708
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.708
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.708
Gorai.012G163200 Gossypium raimondii Gorai.012G163200 N 0.708
Gorai.N026300 Gossypium raimondii Gorai.N026300 N 0.708
MDP0000168914 Malus domestica MDP0000168914 N 0.708
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.708
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.708
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.708
Ciclev10030327m.g Citrus clementina Ciclev10030327m.g N 0.702
orange1.1g045249m.g Citrus sinensis orange1.1g045249m.g N 0.702