Gorai.012G163200 (Gossypium raimondii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Gorai.012G163200 T258492_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.012G163200.1 MADS box 27 74

Links

Other MADS box family TFs
Other Gossypium raimondii TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.N026300 Gossypium raimondii Gorai.N026300 N 1.000
TCM_006325 Theobroma cacao TCM_006325 N 0.938
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.771
AGL61 Arabidopsis thaliana AT2G24840 N 0.771
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.771
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.771
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.771
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.750
Pm021018 Prunus mume Pm021018 N 0.750
Aquca_015_00242 Aquilegia coerulea Aquca_015_00242 N 0.750
Aquca_015_00243 Aquilegia coerulea Aquca_015_00243 N 0.750
Aquca_040_00096 Aquilegia coerulea Aquca_040_00096 N 0.750
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.750
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.750
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.750
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.750
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.729
Bo8g099550 Brassica oleracea Bo8g099550 N 0.729
Bra007829 Brassica rapa Bra007829 N 0.729
Bra026764 Brassica rapa Bra026764 N 0.729
GLYMA17G01771 Glycine max GLYMA17G01771 N 0.729
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.729
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.729
TCM_012489 Theobroma cacao TCM_012489 N 0.729
Ca_04658 Cicer arietinum Ca_04658 N 0.729
Cla006571 Citrullus lanatus Cla006571 N 0.729
Pm021070 Prunus mume Pm021070 N 0.729
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.729
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.729
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.729
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.729
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.729
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.729
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.729
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.729
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.729
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.729
MDP0000434703 Malus domestica MDP0000434703 I 0.729
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.729
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.729
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.708
Bra002480 Brassica rapa Bra002480 N 0.708
Bra022434 Brassica rapa Bra022434 N 0.708
Bra032057 Brassica rapa Bra032057 N 0.708
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.708
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.708
GLYMA20G27361 Glycine max GLYMA20G27361 N 0.708
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.708
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.708
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.708
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.708
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.708
SELMODRAFT_450772 Selaginella moellendorffii SELMODRAFT_450772 N 0.708
SELMODRAFT_450775 Selaginella moellendorffii SELMODRAFT_450775 N 0.708
SELMODRAFT_450776 Selaginella moellendorffii SELMODRAFT_450776 N 0.708
SELMODRAFT_450777 Selaginella moellendorffii SELMODRAFT_450777 N 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.708
Cla010744 Citrullus lanatus Cla010744 N 0.708
Pm021017 Prunus mume Pm021017 N 0.708
Pm021071 Prunus mume Pm021071 N 0.708
Pm030655 Prunus mume Pm030655 I 0.708
29613.m000367 Ricinus communis 29613.m000367 N 0.708
30099.m001672 Ricinus communis 30099.m001672 N 0.708
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.708
Cucsa.342610 Cucumis sativus Cucsa.342610 N 0.708
mgf018529m Mimulus guttatus mgf018529m N 0.708
mgf024307m Mimulus guttatus mgf024307m N 0.708
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.708
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.708
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.708
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.708
evm.TU.contig_46312 Carica papaya evm.TU.contig_46312 N 0.708
evm.TU.supercontig_20.85 Carica papaya evm.TU.supercontig_20.85 N 0.708
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.708
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.708
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.708
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.708
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.708
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.708
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.708
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.708
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.708
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.708
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.708
MDP0000221590 Malus domestica MDP0000221590 N 0.708
MDP0000233925 Malus domestica MDP0000233925 N 0.708
MDP0000278770 Malus domestica MDP0000278770 N 0.708
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.708