Pm016629 (Prunus mume)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pm016629 T257061_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm016629 MADS box 19 66

Links

Other MADS box family TFs
Other Prunus mume TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 1.000
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.917
Pm021070 Prunus mume Pm021070 N 0.917
MDP0000168914 Malus domestica MDP0000168914 N 0.896
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.875
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.875
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.854
Ca_07607 Cicer arietinum Ca_07607 N 0.854
Ca_26354 Cicer arietinum Ca_26354 N 0.854
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.854
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.854
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.854
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.833
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.812
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.812
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.812
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.812
29613.m000367 Ricinus communis 29613.m000367 N 0.812
30099.m001671 Ricinus communis 30099.m001671 N 0.812
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.812
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.812
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.812
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.812
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.792
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.792
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.792
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.792
TCM_040735 Theobroma cacao TCM_040735 N 0.792
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.792
mgf018529m Mimulus guttatus mgf018529m N 0.792
mgf024307m Mimulus guttatus mgf024307m N 0.792
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.792
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.792
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.792
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.792
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.792
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.792
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.792
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.792
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.771
AGL61 Arabidopsis thaliana AT2G24840 N 0.771
AGL62 Arabidopsis thaliana AT5G60440 I 0.771
Bra026764 Brassica rapa Bra026764 N 0.771
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.771
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.771
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.771
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.771
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.771
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.771
Cla006571 Citrullus lanatus Cla006571 N 0.771
Pm021071 Prunus mume Pm021071 N 0.771
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.771
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.771
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.771
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.771
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.771
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.771
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.771
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.771
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.771
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.750
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.750
TCM_006323 Theobroma cacao TCM_006323 N 0.750
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.750
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.750
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.750
Ca_04665 Cicer arietinum Ca_04665 N 0.750
30099.m001672 Ricinus communis 30099.m001672 N 0.750
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.750
MDP0000434703 Malus domestica MDP0000434703 I 0.750
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.750
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.750
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.750
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.750
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.729
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.729
Bo4g165540 Brassica oleracea Bo4g165540 N 0.729
Bo8g099550 Brassica oleracea Bo8g099550 N 0.729
Bra002480 Brassica rapa Bra002480 N 0.729
Bra007829 Brassica rapa Bra007829 N 0.729
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.729
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.729
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.729
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.729
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.729
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.729
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.729
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.729
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.729
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.729
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.729
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.729
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.729
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.729
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.729
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.729
Ca_04662 Cicer arietinum Ca_04662 N 0.729
Pm021018 Prunus mume Pm021018 N 0.729
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.729
mgf023207m Mimulus guttatus mgf023207m N 0.729
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.729
Ciclev10030387m.g Citrus clementina Ciclev10030387m.g N 0.729
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.729
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.729
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.729
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.729
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.729
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.729
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.729
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.729
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.729
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.729
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.729
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.729
MDP0000233925 Malus domestica MDP0000233925 N 0.729
MDP0000278770 Malus domestica MDP0000278770 N 0.729
orange1.1g036705m.g Citrus sinensis orange1.1g036705m.g N 0.729
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.729
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.729
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.729
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.729
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.729
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.727
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.711
AGL28 Arabidopsis thaliana AT1G01530 N 0.708
Bo1g112460 Brassica oleracea Bo1g112460 N 0.708
Bo9g142570 Brassica oleracea Bo9g142570 N 0.708
Bra022434 Brassica rapa Bra022434 N 0.708
Bra032057 Brassica rapa Bra032057 N 0.708
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.708
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.708
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.708
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.708
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.708
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.708
PGSC0003DMG400036006 Solanum tuberosum PGSC0003DMG400036006 N 0.708
PGSC0003DMG400036160 Solanum tuberosum PGSC0003DMG400036160 N 0.708
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.708
TCM_006324 Theobroma cacao TCM_006324 N 0.708
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.708
Ca_04659 Cicer arietinum Ca_04659 N 0.708
Ca_04660 Cicer arietinum Ca_04660 N 0.708
mgf021403m Mimulus guttatus mgf021403m N 0.708
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.708
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.708
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.708
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.708
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.708
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.708
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.708
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.708
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.708
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.708
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.708
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.708
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.708
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.708
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.708
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.708
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.708
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.708
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.708
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.708
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.708
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.708
MDP0000221590 Malus domestica MDP0000221590 N 0.708
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.708
chr1.LjB17A22.10.nc Lotus japonicus chr1.LjB17A22.10.nc N 0.708
LjSGA_074894.2 Lotus japonicus LjSGA_074894.2 N 0.708