Eucgr.H04834 (Eucalyptus grandis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Eucgr.H04834 T257982_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.H04834.1 MADS box 16 63

Links

Other MADS box family TFs
Other Eucalyptus grandis TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.896
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.896
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.896
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.896
mgf018529m Mimulus guttatus mgf018529m N 0.896
mgf024307m Mimulus guttatus mgf024307m N 0.896
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.896
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.875
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.875
TCM_040735 Theobroma cacao TCM_040735 N 0.875
Ca_07607 Cicer arietinum Ca_07607 N 0.875
Ca_26354 Cicer arietinum Ca_26354 N 0.875
MDP0000168914 Malus domestica MDP0000168914 N 0.875
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.875
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.875
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.854
29613.m000367 Ricinus communis 29613.m000367 N 0.854
Ciclev10030387m.g Citrus clementina Ciclev10030387m.g N 0.854
orange1.1g036705m.g Citrus sinensis orange1.1g036705m.g N 0.854
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.854
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.854
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.833
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.833
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.833
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.833
Pm021070 Prunus mume Pm021070 N 0.833
30099.m001671 Ricinus communis 30099.m001671 N 0.833
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.833
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.833
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.833
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.812
AGL61 Arabidopsis thaliana AT2G24840 N 0.812
TCM_006324 Theobroma cacao TCM_006324 N 0.812
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.812
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.812
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.812
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.812
SapurV1A.1128s0080 Salix purpurea SapurV1A.1128s0080 N 0.812
Bo8g099550 Brassica oleracea Bo8g099550 N 0.792
Bra007829 Brassica rapa Bra007829 N 0.792
Cla006571 Citrullus lanatus Cla006571 N 0.792
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.792
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.792
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.792
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.792
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.792
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.792
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.792
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.792
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.792
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.792
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.792
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.792
Bo1g112460 Brassica oleracea Bo1g112460 N 0.771
Bo4g165540 Brassica oleracea Bo4g165540 N 0.771
Bra022434 Brassica rapa Bra022434 N 0.771
Bra026764 Brassica rapa Bra026764 N 0.771
Bra032057 Brassica rapa Bra032057 N 0.771
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.771
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.771
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.771
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.771
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.771
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.771
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.771
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.771
Pm016629 Prunus mume Pm016629 N 0.771
Pm021018 Prunus mume Pm021018 N 0.771
30099.m001672 Ricinus communis 30099.m001672 N 0.771
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.771
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.771
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.771
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.771
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.771
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.771
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.771
MDP0000434703 Malus domestica MDP0000434703 I 0.771
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.771
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.771
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.771
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.763
Bo4g157220 Brassica oleracea Bo4g157220 N 0.750
Bo5g113750 Brassica oleracea Bo5g113750 N 0.750
Bra011938 Brassica rapa Bra011938 N 0.750
Bra038225 Brassica rapa Bra038225 N 0.750
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.750
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.750
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.750
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.750
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.750
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.750
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.750
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.750
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.750
TCM_006323 Theobroma cacao TCM_006323 N 0.750
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.750
Ca_04661 Cicer arietinum Ca_04661 N 0.750
Pm021071 Prunus mume Pm021071 N 0.750
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.750
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.750
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.750
MDP0000233925 Malus domestica MDP0000233925 N 0.750
MDP0000278770 Malus domestica MDP0000278770 N 0.750
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.750
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.750
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.750
Bo4g070340 Brassica oleracea Bo4g070340 N 0.745
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.729
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.729
AGL62 Arabidopsis thaliana AT5G60440 I 0.729
Bra002480 Brassica rapa Bra002480 N 0.729
Bra035685 Brassica rapa Bra035685 N 0.729
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.729
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.729
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.729
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.729
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.729
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.729
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.729
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.729
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.729
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.729
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.729
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.729
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.729
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.729
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.729
Ca_04659 Cicer arietinum Ca_04659 N 0.729
Ca_04660 Cicer arietinum Ca_04660 N 0.729
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.729
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.729
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.729
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.729
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.729
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.729
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.729
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.729
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.729
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.729
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.729
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.729
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.729
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.729
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.729
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.729
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.729
MDP0000221590 Malus domestica MDP0000221590 N 0.729
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.729
Thhalv10000432m.g Eutrema salsugineum Thhalv10000432m.g N 0.729
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.729
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.729
AGL23 Arabidopsis thaliana AT1G65360 N 0.708
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.708
Bo9g142570 Brassica oleracea Bo9g142570 N 0.708
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.708
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.708
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.708
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.708
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.708
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.708
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.708
Ca_04662 Cicer arietinum Ca_04662 N 0.708
Ca_04665 Cicer arietinum Ca_04665 N 0.708
cassava21573.m1 Manihot esculenta cassava21573.m1 N 0.708
Aquca_015_00242 Aquilegia coerulea Aquca_015_00242 N 0.708
Aquca_015_00243 Aquilegia coerulea Aquca_015_00243 N 0.708
Aquca_040_00096 Aquilegia coerulea Aquca_040_00096 N 0.708
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.708
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.708
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.708
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.708
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.708
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.708
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.708
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.708
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.708
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.708
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.708
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.708
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.708
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.708
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.708
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.708
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.708
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.708
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.708
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.708
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.708
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.708
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.708
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.708
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.708
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.708
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.708
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.708
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.708
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.708
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.708
LjSGA_028458.1.1 Lotus japonicus LjSGA_028458.1.1 N 0.708