evm.TU.supercontig_348.1 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.supercontig_348.1 T258237_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_348.1 MADS box 15 62

Links

Other MADS box family TFs
Other Carica papaya TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.contig_37107 Carica papaya evm.TU.contig_37107 N 0.938
evm.TU.contig_33091.3 Carica papaya evm.TU.contig_33091.3 N 0.917
evm.TU.contig_38552 Carica papaya evm.TU.contig_38552 N 0.896
evm.TU.supercontig_695.8 Carica papaya evm.TU.supercontig_695.8 N 0.896
evm.TU.contig_31904 Carica papaya evm.TU.contig_31904 N 0.854
evm.TU.contig_36403 Carica papaya evm.TU.contig_36403 N 0.854
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.854
evm.TU.supercontig_695.2 Carica papaya evm.TU.supercontig_695.2 N 0.854
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.833
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.833
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.833
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.833
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.812
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.812
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.812
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.792
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.792
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.792
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.792
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.771
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.771
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.771
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.771
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.771
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.771
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.771
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.750
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.750
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.750
30099.m001672 Ricinus communis 30099.m001672 N 0.750
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.750
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.750
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.750
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.750
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.750
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.750
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.750
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.750
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.750
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.750
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.750
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.750
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.750
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.750
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.750
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.750
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.750
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.750
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.750
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.729
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.729
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.729
Cla006571 Citrullus lanatus Cla006571 N 0.729
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.729
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.729
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.729
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.729
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.729
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.729
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.729
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.729
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.729
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.729
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.729
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.729
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.729
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.729
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.729
Bra022434 Brassica rapa Bra022434 N 0.708
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.708
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.708
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.708
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.708
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.708
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.708
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.708
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.708
Pm021017 Prunus mume Pm021017 N 0.708
29613.m000367 Ricinus communis 29613.m000367 N 0.708
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.708
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.708
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.708
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.708
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.708
evm.TU.contig_38604 Carica papaya evm.TU.contig_38604 N 0.708
evm.TU.supercontig_106.21 Carica papaya evm.TU.supercontig_106.21 N 0.708
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.708
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.708
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.708
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.708