CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjSGA_102731.1
(
Lotus japonicus
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
LjSGA_102731.1
T259400_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjSGA_102731.1
MADS box
13
60
KITNENNLQVSFCKRRQALFKNASKLCTLYGAEMAIIVLSPSQNFFSF
Links
Other
MADS box
family TFs
Other
Lotus japonicus
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LjSGA_064645.1
Lotus japonicus
LjSGA_064645.1
N
0.938
LjSGA_070157.1
Lotus japonicus
LjSGA_070157.1
N
0.896
LjSGA_074894.2
Lotus japonicus
LjSGA_074894.2
N
0.854
chr1.LjB17A22.10.nc
Lotus japonicus
chr1.LjB17A22.10.nc
N
0.833
chr1.LjB17A22.60.nc
Lotus japonicus
chr1.LjB17A22.60.nc
N
0.833
chr1.LjB17A22.80.nc
Lotus japonicus
chr1.LjB17A22.80.nc
N
0.833
LjSGA_056509.1
Lotus japonicus
LjSGA_056509.1
N
0.812