CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF140
(
Macaca mulatta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMMUG00000003150
T099132_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF140
M04621_2.00
Homo sapiens
DRCAATTCCGCTCN
NGAGCGGAATTGYH
SELEX
Yin et al.(2017)
ZNF140_eDBD_HT-SELEX
0.821
0.991
ZNF140
M08372_2.00
Homo sapiens
CAATTCYGCYCHNNNNNNNNNNNB
VNNNNNNNNNNNDGRGCRGAATTG
ChIP-seq
Schmitges et al.(2016)
P52738_3-10.RCADE
0.821
0.991
ZNF140
M08945_2.00
Homo sapiens
NNNDNYBYWGCAATTCYRCTCCHN
NDGGAGYRGAATTGCWRVRNHNNN
Misc
Kulakovskiy et al.(2013)
ZN140_HUMAN.H11MO.0.C
0.821
0.991
ZNF140
M04622_2.00
Homo sapiens
NRCAATTCCGCTCV
BGAGCGGAATTGYN
SELEX
Yin et al.(2017)
ZNF140_eDBD_Methyl-HT-SELEX
0.821
0.991
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000004213
C2H2 ZF
161
183
YGCHECGKTFGRRFSLVLHQRTH
ENSMMUP00000004213
C2H2 ZF
189
211
YACKECGKTFSQISNLVKHQMIH
ENSMMUP00000004213
C2H2 ZF
217
239
HECKDCNKTFSYLSFLIEHQRTH
ENSMMUP00000004213
C2H2 ZF
245
267
YECTECGKAFSRASNLTRHQRIH
ENSMMUP00000004213
C2H2 ZF
273
295
YICRKCGKAFSSGSELIRHQITH
ENSMMUP00000004213
C2H2 ZF
301
323
YECIECGKAFRRFSHLTRHQSIH
ENSMMUP00000004213
C2H2 ZF
329
351
YECNECRKAFRCHSFLTKHQRIH
ENSMMUP00000004213
C2H2 ZF
357
379
YECDECGKVFTWHASLIQHTKIH
ENSMMUP00000004213
C2H2 ZF
385
407
YACAECDKAFSRSFSLILHQRTH
ENSMMUP00000004213
C2H2 ZF
413
435
YVCKVCNKSFSWSSNLAKHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Macaca mulatta
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_kg.C_150093
Phytophthora capsici
estExt_fgenesh1_kg.C_150093
N
0.000
F443_20672
Phytophthora parasitica
F443_20672
N
0.000
maker-pir_contig_516-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_516-fgenesh-gene-0.3
N
0.000
maker-pve_contig_734-fgenesh-gene-0.2
Pythium vexans
maker-pve_contig_734-fgenesh-gene-0.2
N
0.000
Phyra80923
Phytophthora ramorum
Phyra80923
N
0.000
Physo132964
Phytophthora sojae
Physo132964
N
0.000
PYU1_G002844
Pythium ultimum
PYU1_G002844
N
0.000
PYU1_G002847
Pythium ultimum
PYU1_G002847
N
0.000