PRDM6 (Monodelphis domestica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMODG00000013415 T100013_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM6
M08277_2.00 		Homo sapiens
TTTTYYWBHHTTTYYHYTBYN
NRVARDRRAAADDVWRRAAAA		 ChIP-seq
Schmitges et al.(2016)
Q9NQX0.MEME 		0.827 1.000
PRDM6
M08855_2.00 		Homo sapiens
NNKTTTTCYYBYB
VRVRRGAAAAMNN		 Misc
Kulakovskiy et al.(2013)
PRDM6_HUMAN.H11MO.0.C 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000016775 C2H2 ZF 482 503
ENSMODP00000016775 C2H2 ZF 510 532
ENSMODP00000016775 C2H2 ZF 538 560
ENSMODP00000016775 C2H2 ZF 566 587

Links

Other C2H2 ZF family TFs
Other Monodelphis domestica TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R013387 Calypte anna Aan_R013387 I
Afo_R010236 Aptenodytes forsteri Afo_R010236 I
Alligator_sinensis_CCG010229.1 Alligator sinensis Alligator_sinensis_CCG010229.1 I
Brh_R006050 Buceros rhinoceros Brh_R006050 I
Cmyd_10010560 Chelonia mydas Cmyd_10010560 I
BCL6 Anolis carolinensis ENSACAG00000006666 I
ENSAMEG00000000812 Ailuropoda melanoleuca ENSAMEG00000000812 I
ENSAPLG00000015868 Anas platyrhynchos ENSAPLG00000015868 I
BCL6 Bos taurus ENSBTAG00000001511 I
ENSBTAP00000001978-D1 Bos grunniens ENSBTAP00000001978-D1 I
BCL6 Canis familiaris ENSCAFG00000013904 I
BCL6 Callithrix jacchus ENSCJAG00000014375 I
BCL6 Cavia porcellus ENSCPOG00000004090 I
ENSCSAG00000009138 Chlorocebus sabaeus ENSCSAG00000009138 I
BCL6 Dasypus novemcinctus ENSDNOG00000004306 I
Bcl6 Dipodomys ordii ENSDORG00000005608 I
BCL6 Equus caballus ENSECAG00000004556 I
BCL6 Erinaceus europaeus ENSEEUG00000000344 I
BCL6 Echinops telfairi ENSETEG00000014830 I
ENSFALG00000007407 Ficedula albicollis ENSFALG00000007407 I
BCL6 Homo sapiens ENSG00000113916 D
BCL6 Gallus gallus ENSGALG00000007357 I
BCL6 Gorilla gorilla ENSGGOG00000026549 I
BCL6 Loxodonta africana ENSLAFG00000012300 I
ENSMEUG00000004411 Macropus eugenii ENSMEUG00000004411 I
BCL6 Meleagris gallopavo ENSMGAG00000007602 I
BCL6 Microcebus murinus ENSMICG00000001780 I
BCL6 Myotis lucifugus ENSMLUG00000012905 I
BCL6 Macaca mulatta ENSMMUG00000009198 I
ENSMPUG00000003415 Mustela putorius furo ENSMPUG00000003415 I
Bcl6 Mus musculus ENSMUSG00000022508 D
ENSNLEG00000006705 Nomascus leucogenys ENSNLEG00000006705 I
BCL6 Ornithorhynchus anatinus ENSOANG00000000872 I
BCL6 Oryctolagus cuniculus ENSOCUG00000005429 I
BCL6 Otolemur garnettii ENSOGAG00000007638 I
BCL6 Ochotona princeps ENSOPRG00000005797 I
ENSP00000384371 Macaca fascicularis ENSP00000384371 I
ENSPANG00000017677 Papio anubis ENSPANG00000017677 I
ENSPPYG00000014395 Pongo abelii ENSPPYG00000014395 I
ENSPSIG00000014529 Pelodiscus sinensis ENSPSIG00000014529 I
BCL6 Pan troglodytes ENSPTRG00000015728 I
Bcl6 Rattus norvegicus ENSRNOG00000001843 I
ENSSHAG00000013935 Sarcophilus harrisii ENSSHAG00000013935 I
BCL6 Sus scrofa ENSSSCG00000011810 I
BCL6 Taeniopygia guttata ENSTGUG00000009413 I
BCL6 Tursiops truncatus ENSTTRG00000017230 I
Gfo_R004424 Geospiza fortis Gfo_R004424 I
Myotis_brandtii_BCL6_10016106 Myotis brandtii Myotis_brandtii_BCL6_10016106 I
Pvit_01837 Pogona vitticeps Pvit_01837 I
Tal_R005794 Tyto alba Tal_R005794 I
bcl6.S Xenopus laevis XB-GENE-17336238 I
bcl6 Xenopus tropicalis XB-GENE-984479 I
bcl6.L Xenopus laevis XB-GENE-984483 I