CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM5
(
Monodelphis domestica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMODG00000018942
T100122_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000023632
C2H2 ZF
169
192
HACPHCESSFASQEILAEHLQMLH
ENSMODP00000023632
C2H2 ZF
201
222
FKCKNCGKKFPVKQALQRHILH
ENSMODP00000023632
C2H2 ZF
236
256
FHCYVCNTSLCSESSLEQHRE
ENSMODP00000023632
C2H2 ZF
264
289
FICKADGCGKRFRSKDALKKHKENIH
ENSMODP00000023632
C2H2 ZF
297
319
LICTVCSKKCSSLSTLQEHRKVH
ENSMODP00000023632
C2H2 ZF
322
344
FECQECNKKFITPNQLKRHMITH
ENSMODP00000023632
C2H2 ZF
350
372
YNCEVCNKSFKRIDQVAAHKIIH
ENSMODP00000023632
C2H2 ZF
378
400
YKCKLCGKGFAHRNVYKNHKKTH
ENSMODP00000023632
C2H2 ZF
406
428
FQCEECKALFRTPFSLQRHLLIH
ENSMODP00000023632
C2H2 ZF
434
457
FKCDQCDATFKRKDTLNVHIQVVH
ENSMODP00000023632
C2H2 ZF
463
485
YKCDLCDKAFVTPSVLKSHKKTH
ENSMODP00000023632
C2H2 ZF
492
513
ICPYCGQKFASNGTLRVHIRSH
ENSMODP00000023632
C2H2 ZF
519
541
YQCPYCDKAFSKNDGLKMHIRTH
ENSMODP00000023632
C2H2 ZF
547
569
YQCTQCNKAFSQKRGLDEHMRTH
ENSMODP00000023632
C2H2 ZF
575
597
FQCDVCDLSFSLKKMLIRHKLTH
ENSMODP00000023632
C2H2 ZF
605
627
ECPFCHKKFTRNDYLKVHMENVH
Links
Other
C2H2 ZF
family TFs
Other
Monodelphis domestica
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_00758
Schistosoma haematobium
A_00758
N
csin108066
Clonorchis sinensis
csin108066
N
ECPE_0000628501
Echinostoma caproni
ECPE_0000628501
N
SCUD_0001663901
Schistosoma curassoni
SCUD_0001663901
N
Smp_094930
Schistosoma mansoni
Smp_094930
N
SMRZ_0002027101
Schistosoma margrebowiei
SMRZ_0002027101
N
SMTD_0002174001
Schistosoma mattheei
SMTD_0002174001
N
T265_02221
Opisthorchis viverrini
T265_02221
N