CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM5
(
Monodelphis domestica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMODG00000018942
T100122_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000023632
C2H2 ZF
169
192
HACPHCESSFASQEILAEHLQMLH
ENSMODP00000023632
C2H2 ZF
201
222
FKCKNCGKKFPVKQALQRHILH
ENSMODP00000023632
C2H2 ZF
236
256
FHCYVCNTSLCSESSLEQHRE
ENSMODP00000023632
C2H2 ZF
264
289
FICKADGCGKRFRSKDALKKHKENIH
ENSMODP00000023632
C2H2 ZF
297
319
LICTVCSKKCSSLSTLQEHRKVH
ENSMODP00000023632
C2H2 ZF
322
344
FECQECNKKFITPNQLKRHMITH
ENSMODP00000023632
C2H2 ZF
350
372
YNCEVCNKSFKRIDQVAAHKIIH
ENSMODP00000023632
C2H2 ZF
378
400
YKCKLCGKGFAHRNVYKNHKKTH
ENSMODP00000023632
C2H2 ZF
406
428
FQCEECKALFRTPFSLQRHLLIH
ENSMODP00000023632
C2H2 ZF
434
457
FKCDQCDATFKRKDTLNVHIQVVH
ENSMODP00000023632
C2H2 ZF
463
485
YKCDLCDKAFVTPSVLKSHKKTH
ENSMODP00000023632
C2H2 ZF
492
513
ICPYCGQKFASNGTLRVHIRSH
ENSMODP00000023632
C2H2 ZF
519
541
YQCPYCDKAFSKNDGLKMHIRTH
ENSMODP00000023632
C2H2 ZF
547
569
YQCTQCNKAFSQKRGLDEHMRTH
ENSMODP00000023632
C2H2 ZF
575
597
FQCDVCDLSFSLKKMLIRHKLTH
ENSMODP00000023632
C2H2 ZF
605
627
ECPFCHKKFTRNDYLKVHMENVH
Links
Other
C2H2 ZF
family TFs
Other
Monodelphis domestica
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAPLG00000013828
Anas platyrhynchos
ENSAPLG00000013828
N
0.766
PRDM5
Meleagris gallopavo
ENSMGAG00000010710
N
0.765
Afo_R008783
Aptenodytes forsteri
Afo_R008783
N
0.765
Brh_R013301
Buceros rhinoceros
Brh_R013301
N
0.765
Gfo_R013938
Geospiza fortis
Gfo_R013938
N
0.765
PRDM5
Taeniopygia guttata
ENSTGUG00000001920
N
0.764
PRDM5
Anolis carolinensis
ENSACAG00000012999
N
0.762
ENSPSIG00000013505
Pelodiscus sinensis
ENSPSIG00000013505
N
0.762
ENSLACG00000009187
Latimeria chalumnae
ENSLACG00000009187
N
0.757