CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM5
(
Meleagris gallopavo
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMGAG00000010710
T098193_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000011137
C2H2 ZF
139
162
HACPNCESSFASQEILAEHLQTLH
ENSMGAP00000011137
C2H2 ZF
171
192
FKCRNCGKKFPVKQALQRHVLQ
ENSMGAP00000011137
C2H2 ZF
206
226
FQCSVCNTSFSSESSYEQHKE
ENSMGAP00000011137
C2H2 ZF
234
259
FICKADSCGKRFKSKDALKKHKENVH
ENSMGAP00000011137
C2H2 ZF
267
289
LTCSVCNKKCSSTTNLQEHRKVH
ENSMGAP00000011137
C2H2 ZF
292
314
FECQECDKRFISANQLKRHMITH
ENSMGAP00000011137
C2H2 ZF
320
342
YTCEVCNKSFKRLDQVTAHKIIH
ENSMGAP00000011137
C2H2 ZF
348
370
YKCKLCGKGFAHRNVYKNHKKTH
ENSMGAP00000011137
C2H2 ZF
376
398
FQCEECKALFRTPFSLQRHLLIH
ENSMGAP00000011137
C2H2 ZF
404
427
FKCDHCDATFKRKDTLNVHIQVVH
ENSMGAP00000011137
C2H2 ZF
433
455
YKCDLCDKAFVTPSVLKSHKKTH
ENSMGAP00000011137
C2H2 ZF
462
483
ICPYCGQKFASNGTLRVHIRSH
ENSMGAP00000011137
C2H2 ZF
489
511
YQCPYCDKAFSKNDGLKMHIRTH
ENSMGAP00000011137
C2H2 ZF
517
539
YQCSECNKAFSQKRGLDEHMRTH
ENSMGAP00000011137
C2H2 ZF
545
567
FQCDVCDLSFSLKKMLIRHKLTH
ENSMGAP00000011137
C2H2 ZF
575
597
ECQLCHKKFTRNDYLKVHMENVH
Links
Other
C2H2 ZF
family TFs
Other
Meleagris gallopavo
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAPLG00000013828
Anas platyrhynchos
ENSAPLG00000013828
N
0.820
Afo_R008783
Aptenodytes forsteri
Afo_R008783
N
0.820
PRDM5
Anolis carolinensis
ENSACAG00000012999
N
0.817
ENSPSIG00000013505
Pelodiscus sinensis
ENSPSIG00000013505
N
0.817
Brh_R013301
Buceros rhinoceros
Brh_R013301
N
0.806
Gfo_R013938
Geospiza fortis
Gfo_R013938
N
0.806
PRDM5
Taeniopygia guttata
ENSTGUG00000001920
N
0.805
ENSLACG00000009187
Latimeria chalumnae
ENSLACG00000009187
N
0.798
Aan_R014124
Calypte anna
Aan_R014124
N
0.792
PRDM5
Monodelphis domestica
ENSMODG00000018942
N
0.765