CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSONIG00000002719 *(Oreochromis niloticus)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	ENSONIG00000002719	T103956_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
opa M03668_2.00	Drosophila melanogaster	BVCCCCCCRYNGHB	VDCNRYGGGGGGBV	SELEX Nitta et al.(2015) opa_1	0.778	0.848
opa M05861_2.00	Drosophila melanogaster	VCCCCCCRYNGNK	MNCNRYGGGGGGB	SMiLE-seq Isakova et al.(2017) Opa	0.778	0.848
opa M06468_2.00	Drosophila melanogaster	GMCCCCCCGCDG	CHGCGGGGGGKC	B1H Mathelier et al.(2014) MA0456.1	0.778	0.848
opa M06062_2.00	Drosophila melanogaster	GMCCCCCCRCDG	CHGYGGGGGGKC	B1H Zhu et al.(2011) opa_NAR_FBgn0003002	0.778	0.848
opa M06063_2.00	Drosophila melanogaster	MKVMMCCCCMCYR	YRGKGGGGKKBMK	B1H Zhu et al.(2011) Opa_SANGER_5_FBgn0003002	0.778	0.848
ref-2 M00621_2.00	Caenorhabditis elegans	CMYRSNGNBH	DVNCNSYRKG	PBM Narasimhan et al.(2015) pTH9089	0.762	0.739
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSONIP00000003408	C2H2 ZF	261	288	YVCHWENCVRDRKPFKAKYKLVNHVRVH
ENSONIP00000003408	C2H2 ZF	294	318	FPCPFHGCEKVFARSENLKIHKRTH
ENSONIP00000003408	C2H2 ZF	326	350	FKCEFEGCNRRFANSSDRKKHSHVH
ENSONIP00000003408	C2H2 ZF	356	380	YMCKVRGCDKCYTHPSSLRKHMKLH

Links
Other C2H2 ZF family TFs
Other *Oreochromis niloticus* TFs