gli2b (Oryzias latipes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSORLG00000012490 T104891_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLI3
M04416_2.00 		Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX 		0.795 0.965
GLI3
M02642_2.00 		Homo sapiens
GACCACCCANK
MNTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI3 		0.795 0.965
GLI3
M08875_2.00 		Homo sapiens
VRACCACCCAV
BTGGGTGGTYB		 Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B 		0.795 0.965
GLI3
M10167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_01 		0.795 0.965
GLI3
M10168_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_Q5_01 		0.795 0.965
GLI3
M04417_2.00 		Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG		 SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX 		0.795 0.965
Gli2
M01024_2.00 		Mus musculus
NGACCACCYN
NRGGTGGTCN		 PBM
Peterson et al.(2012)
Gli2 		0.779 0.922
GLI2
M02875_2.00 		Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC		 SELEX
Jolma et al.(2013)
GLI2_1 		0.779 0.922
GLI2
M02876_2.00 		Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC		 SELEX
Jolma et al.(2013)
GLI2_2 		0.779 0.922
GLI2
M02732_2.00 		Homo sapiens
GACCACMCAN
NTGKGTGGTC		 SELEX
Jolma et al.(2010)
GLI2_monomer 		0.779 0.922
GLI2
M04402_2.00 		Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX 		0.779 0.922
GLI2
M02641_2.00 		Homo sapiens
GACCACCCAHG
CDTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI2 		0.779 0.922
GLI2
M10114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q3 		0.779 0.922
GLI2
M10115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q6 		0.779 0.922
GLI2
M04403_2.00 		Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY		 SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX 		0.779 0.922
Gli1
M01023_2.00 		Mus musculus
NGACCACCHN
NDGGTGGTCN		 PBM
Peterson et al.(2012)
Gli1 		0.766 0.861
GLI1
M02643_2.00 		Homo sapiens
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI1 		0.766 0.861
Gli1
M08976_2.00 		Mus musculus
RGRCCACCCASV
BSTGGGTGGYCY		 Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C 		0.766 0.861
GLI1
M10176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q2 		0.766 0.861
GLI1
M10177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3_01 		0.766 0.861
GLI1
M10178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3 		0.766 0.861
GLI1
M10179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI_Q6 		0.766 0.861
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000015645 C2H2 ZF 457 482
ENSORLP00000015645 C2H2 ZF 490 517
ENSORLP00000015645 C2H2 ZF 523 547
ENSORLP00000015645 C2H2 ZF 553 578
ENSORLP00000015645 C2H2 ZF 584 609

Links

Other C2H2 ZF family TFs
Other Oryzias latipes TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003640 Calypte anna Aan_R003640 I 0.789
Aan_R014715 Calypte anna Aan_R014715 I 0.795
Afo_R006826 Aptenodytes forsteri Afo_R006826 I 0.789
Afo_R007816 Aptenodytes forsteri Afo_R007816 I 0.795
Brh_R008256 Buceros rhinoceros Brh_R008256 I 0.795
Brh_R010932 Buceros rhinoceros Brh_R010932 I 0.789
Cmyd_10007839 Chelonia mydas Cmyd_10007839 I 0.795
Cmyd_10009086 Chelonia mydas Cmyd_10009086 I 0.789
GLI2 Anolis carolinensis ENSACAG00000004133 I 0.791
GLI1 Anolis carolinensis ENSACAG00000006541 I 0.792
GLI3 Anolis carolinensis ENSACAG00000017547 I 0.795
ENSAMEG00000004878 Ailuropoda melanoleuca ENSAMEG00000004878 I 0.766
ENSAMEG00000008405 Ailuropoda melanoleuca ENSAMEG00000008405 I 0.795
ENSAMEG00000008708 Ailuropoda melanoleuca ENSAMEG00000008708 I 0.779
ENSAMXG00000002477 Astyanax mexicanus ENSAMXG00000002477 I 0.799
ENSAMXG00000003125 Astyanax mexicanus ENSAMXG00000003125 I 0.791
ENSAMXG00000006646 Astyanax mexicanus ENSAMXG00000006646 I 0.791
ENSAMXG00000017236 Astyanax mexicanus ENSAMXG00000017236 I 0.792
ENSAPLG00000004361 Anas platyrhynchos ENSAPLG00000004361 I 0.795
ENSAPLG00000005128 Anas platyrhynchos ENSAPLG00000005128 I 0.790
ENSAPLG00000015141 Anas platyrhynchos ENSAPLG00000015141 I 0.789
GLI1 Bos taurus ENSBTAG00000006631 I 0.766
GLI3 Bos taurus ENSBTAG00000010671 I 0.795
GLI2 Bos taurus ENSBTAG00000011682 I 0.779
ENSBTAP00000008704-D1 Bos grunniens ENSBTAP00000008704-D1 I 0.766
GLI1 Canis familiaris ENSCAFG00000000223 I 0.766
GLI3 Canis familiaris ENSCAFG00000003535 I 0.795
GLI2 Canis familiaris ENSCAFG00000004821 I 0.779
GLI3 Choloepus hoffmanni ENSCHOG00000003774 I 0.795
ENSCING00000012018 Ciona intestinalis ENSCING00000012018 I 0.773
GLI1 Callithrix jacchus ENSCJAG00000007324 I 0.766
GLI3 Callithrix jacchus ENSCJAG00000007690 I 0.795
ENSCJAG00000013342 Callithrix jacchus ENSCJAG00000013342 I 0.779
GLI1 Cavia porcellus ENSCPOG00000005414 I 0.766
GLI2 Cavia porcellus ENSCPOG00000015189 I 0.779
ENSCSAG00000004897 Chlorocebus sabaeus ENSCSAG00000004897 I 0.766
ENSCSAG00000015361 Chlorocebus sabaeus ENSCSAG00000015361 I 0.795
ENSCSAG00000016668 Chlorocebus sabaeus ENSCSAG00000016668 I 0.779
ENSCSAVG00000009575 Ciona savignyi ENSCSAVG00000009575 I 0.773
gli2b Danio rerio ENSDARG00000020884 I 0.791
gli3 Danio rerio ENSDARG00000052131 I 0.797
gli1 Danio rerio ENSDARG00000101244 I 0.782
GLI2 Dasypus novemcinctus ENSDNOG00000008730 I 0.779
GLI1 Dasypus novemcinctus ENSDNOG00000017512 I 0.766
GLI3 Dasypus novemcinctus ENSDNOG00000049286 I 0.795
Gli1 Dipodomys ordii ENSDORG00000007124 I 0.766
ENSECAG00000008016 Equus caballus ENSECAG00000008016 I 0.770
GLI3 Equus caballus ENSECAG00000009281 I 0.795
GLI1 Equus caballus ENSECAG00000011246 I 0.766
GLI3 Echinops telfairi ENSETEG00000003955 I 0.779
GLI1 Echinops telfairi ENSETEG00000006674 I 0.768
ENSFALG00000005113 Ficedula albicollis ENSFALG00000005113 I 0.795
ENSFALG00000013217 Ficedula albicollis ENSFALG00000013217 I 0.789
GLI1 Felis catus ENSFCAG00000002081 I 0.766
GLI3 Felis catus ENSFCAG00000011989 I 0.795
GLI2 Felis catus ENSFCAG00000014531 I 0.779
GLI2 Homo sapiens ENSG00000074047 D 0.779
GLI3 Homo sapiens ENSG00000106571 D 0.795
GLI1 Homo sapiens ENSG00000111087 D 0.766
ENSGACG00000004834 Gasterosteus aculeatus ENSGACG00000004834 I 0.827
GLI2 Gallus gallus ENSGALG00000011630 I 0.789
ENSGALG00000012329 Gallus gallus ENSGALG00000012329 I 0.795
ENSGALG00000014639 Gallus gallus ENSGALG00000014639 I 0.780
GLI1 Gorilla gorilla ENSGGOG00000001974 I 0.766
GLI3 Gorilla gorilla ENSGGOG00000002026 I 0.795
GLI2 Gorilla gorilla ENSGGOG00000009653 I 0.775
ENSLACG00000017364 Latimeria chalumnae ENSLACG00000017364 I 0.794
GLI3 Loxodonta africana ENSLAFG00000008944 I 0.795
GLI1 Loxodonta africana ENSLAFG00000022910 I 0.766
ENSLOCG00000005938 Lepisosteus oculatus ENSLOCG00000005938 I 0.792
ENSLOCG00000011983 Lepisosteus oculatus ENSLOCG00000011983 I 0.785
ENSMEUG00000009702 Macropus eugenii ENSMEUG00000009702 I 0.766
ENSMEUG00000013134 Macropus eugenii ENSMEUG00000013134 I 0.795
ENSMGAG00000003540 Meleagris gallopavo ENSMGAG00000003540 I 0.780
GLI2 Meleagris gallopavo ENSMGAG00000011872 I 0.789
GLI3 Meleagris gallopavo ENSMGAG00000012277 I 0.795
GLI3 Microcebus murinus ENSMICG00000010785 I 0.779
GLI1 Myotis lucifugus ENSMLUG00000001013 I 0.766
GLI3 Myotis lucifugus ENSMLUG00000015711 I 0.795
GLI2 Macaca mulatta ENSMMUG00000001868 I 0.779
GLI3 Macaca mulatta ENSMMUG00000013614 I 0.795
GLI1 Macaca mulatta ENSMMUG00000022058 I 0.766
ENSMMUP00000002494 Macaca fascicularis ENSMMUP00000002494 I 0.779
GLI2 Monodelphis domestica ENSMODG00000000245 I 0.779
GLI3 Monodelphis domestica ENSMODG00000002714 I 0.795
ENSMPUG00000000986 Mustela putorius furo ENSMPUG00000000986 I 0.779
ENSMPUG00000001825 Mustela putorius furo ENSMPUG00000001825 I 0.766
ENSMPUG00000018143 Mustela putorius furo ENSMPUG00000018143 I 0.795
Gli1 Mus musculus ENSMUSG00000025407 D 0.766
Gli2 Mus musculus ENSMUSG00000048402 D 0.779
ENSNLEG00000000944 Nomascus leucogenys ENSNLEG00000000944 I 0.779
ENSNLEG00000003160 Nomascus leucogenys ENSNLEG00000003160 I 0.795
ENSNLEG00000017337 Nomascus leucogenys ENSNLEG00000017337 I 0.766
GLI3 Ornithorhynchus anatinus ENSOANG00000010699 I 0.795
ENSOARG00000006674 Ovis aries ENSOARG00000006674 I 0.766
ENSOARG00000013052 Ovis aries ENSOARG00000013052 I 0.779
ENSOARG00000017420 Ovis aries ENSOARG00000017420 I 0.795
GLI2 Oryctolagus cuniculus ENSOCUG00000000638 I 0.779
GLI3 Oryctolagus cuniculus ENSOCUG00000006563 I 0.795
GLI1 Oryctolagus cuniculus ENSOCUG00000011128 I 0.766
GLI1 Otolemur garnettii ENSOGAG00000005219 I 0.766
GLI3 Otolemur garnettii ENSOGAG00000012651 I 0.795
GLI2 Otolemur garnettii ENSOGAG00000032438 I 0.785
ENSONIG00000006298 Oreochromis niloticus ENSONIG00000006298 I 0.827
GLI1 Ochotona princeps ENSOPRG00000006483 I 0.766
GLI3 Ochotona princeps ENSOPRG00000011225 I 0.795
ENSP00000228682 Macaca fascicularis ENSP00000228682 I 0.766
ENSP00000379258 Macaca fascicularis ENSP00000379258 I 0.795
ENSP00000390436-D1 Bos grunniens ENSP00000390436-D1 I 0.779
ENSPANG00000014545 Papio anubis ENSPANG00000014545 I 0.795
ENSPANG00000017044 Papio anubis ENSPANG00000017044 I 0.766
ENSPANG00000024168 Papio anubis ENSPANG00000024168 I 0.779
GLI2 Procavia capensis ENSPCAG00000001704 I 0.777
GLI3 Procavia capensis ENSPCAG00000015092 I 0.795
ENSPFOG00000005116 Poecilia formosa ENSPFOG00000005116 I 0.789
ENSPFOG00000019294 Poecilia formosa ENSPFOG00000019294 I 0.827
ENSPPYG00000004689 Pongo abelii ENSPPYG00000004689 I 0.766
ENSPPYG00000012778 Pongo abelii ENSPPYG00000012778 I 0.779
ENSPPYG00000017613 Pongo abelii ENSPPYG00000017613 I 0.795
ENSPSIG00000008752 Pelodiscus sinensis ENSPSIG00000008752 I 0.789
ENSPSIG00000017804 Pelodiscus sinensis ENSPSIG00000017804 I 0.795
GLI1 Pan troglodytes ENSPTRG00000005133 I 0.766
GLI2 Pan troglodytes ENSPTRG00000012413 I 0.779
GLI3 Pan troglodytes ENSPTRG00000019117 I 0.795
GLI1 Pteropus vampyrus ENSPVAG00000012109 I 0.766
GLI3 Pteropus vampyrus ENSPVAG00000015920 I 0.795
Gli2 Rattus norvegicus ENSRNOG00000007261 I 0.779
Gli3 Rattus norvegicus ENSRNOG00000014395 I 0.768
Gli1 Rattus norvegicus ENSRNOG00000025120 I 0.766
ENSSHAG00000004233 Sarcophilus harrisii ENSSHAG00000004233 I 0.779
ENSSHAG00000006652 Sarcophilus harrisii ENSSHAG00000006652 I 0.766
ENSSHAG00000009727 Sarcophilus harrisii ENSSHAG00000009727 I 0.795
GLI2 Sus scrofa ENSSSCG00000015733 I 0.779
ENSSTOG00000004582 Ictidomys tridecemlineatus ENSSTOG00000004582 I 0.779
ENSSTOG00000020366 Ictidomys tridecemlineatus ENSSTOG00000020366 I 0.766
GLI3 Tupaia belangeri ENSTBEG00000006673 I 0.795
GLI2 Taeniopygia guttata ENSTGUG00000004599 I 0.789
gli2b Tetraodon nigroviridis ENSTNIG00000010251 I 0.780
gli2b Tetraodon nigroviridis ENSTNIG00000013668 I 0.825
gli2b Tetraodon nigroviridis ENSTNIG00000017828 I 0.782
gli2b Takifugu rubripes ENSTRUG00000007692 I 0.825
gli2b Takifugu rubripes ENSTRUG00000010444 I 0.791
ENSTSYG00000009406 Tarsius syrichta ENSTSYG00000009406 I 0.795
GLI2 Tursiops truncatus ENSTTRG00000002058 I 0.768
GLI3 Tursiops truncatus ENSTTRG00000003628 I 0.795
GLI1 Tursiops truncatus ENSTTRG00000013086 I 0.766
ENSXMAG00000001777 Xiphophorus maculatus ENSXMAG00000001777 I 0.827
ENSXMAG00000006443 Xiphophorus maculatus ENSXMAG00000006443 I 0.789
Gfo_R001212 Geospiza fortis Gfo_R001212 I 0.789
Gfo_R007869 Geospiza fortis Gfo_R007869 I 0.795
Gfo_R013682 Geospiza fortis Gfo_R013682 I 0.790
HelroG111329 Helobdella robusta HelroG111329 I 0.775
Myotis_brandtii_GLI1_10018379 Myotis brandtii Myotis_brandtii_GLI1_10018379 I 0.766
Myotis_brandtii_Gli2_10019076 Myotis brandtii Myotis_brandtii_Gli2_10019076 I 0.779
Ogr02489 Ophisaurus gracilis Ogr02489 I 0.791
Pvit_05813 Pogona vitticeps Pvit_05813 I 0.792
Pvit_06470 Pogona vitticeps Pvit_06470 I 0.791
Pvit_19093 Pogona vitticeps Pvit_19093 I 0.795
Tal_R006208 Tyto alba Tal_R006208 I 0.789
Tal_R009020 Tyto alba Tal_R009020 I 0.790
gli3.L Xenopus laevis XB-GENE-865509 I 0.795
XP_002933449 Xenopus tropicalis XP_002933449 I 0.795
XP_002933450 Xenopus tropicalis XP_002933450 I 0.795