ZNF354C (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000017613 T108142_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF354C
M02666_2.00 		Homo sapiens
VWCCAC
GTGGAB		 SELEX
Mathelier et al.(2014)
MA0130.1 		0.802 0.992
ZNF354C
M10272_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$KID3_01 		0.802 0.992
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000030091 C2H2 ZF 216 238
ENSPTRP00000030091 C2H2 ZF 244 266
ENSPTRP00000030091 C2H2 ZF 272 294
ENSPTRP00000030091 C2H2 ZF 300 322
ENSPTRP00000030091 C2H2 ZF 328 350
ENSPTRP00000030091 C2H2 ZF 356 378
ENSPTRP00000030091 C2H2 ZF 384 406
ENSPTRP00000030091 C2H2 ZF 412 434
ENSPTRP00000030091 C2H2 ZF 440 462
ENSPTRP00000030091 C2H2 ZF 468 490
ENSPTRP00000030091 C2H2 ZF 496 518

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava15362.m1 Manihot esculenta cassava15362.m1 I
Cucsa.058770 Cucumis sativus Cucsa.058770 I
Gorai.009G329400 Gossypium raimondii Gorai.009G329400 I
GSMUA_Achr5G19200_001 Musa acuminata GSMUA_Achr5G19200_001 I
Lus10001149.g Linum usitatissimum Lus10001149.g I
MDP0000244794 Malus domestica MDP0000244794 I
PGSC0003DMG400000922 Solanum tuberosum PGSC0003DMG400000922 I
PGSC0003DMG400029440 Solanum tuberosum PGSC0003DMG400029440 I
PK05732.1 Cannabis sativa PK05732.1 D
Pm014775 Prunus mume Pm014775 I
POPTR_0004s01060 Populus trichocarpa POPTR_0004s01060 I
POPTR_0010s10990 Populus trichocarpa POPTR_0010s10990 I
PRUPE_ppa015662mg Prunus persica PRUPE_ppa015662mg I
PRUPE_ppa021540mg Prunus persica PRUPE_ppa021540mg I
SapurV1A.0429s0100 Salix purpurea SapurV1A.0429s0100 I
SapurV1A.3361s0010 Salix purpurea SapurV1A.3361s0010 I
Solyc12g006280.1 Solanum lycopersicum Solyc12g006280.1 I
TCM_001942 Theobroma cacao TCM_001942 I
TCM_030248 Theobroma cacao TCM_030248 I
Thhalv10017090m.g Eutrema salsugineum Thhalv10017090m.g I
Thhalv10020738m.g Eutrema salsugineum Thhalv10020738m.g I