PK05732.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK05732.1 T290356_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05732.1
M01276_2.00		 Cannabis sativa
HNATTCBNN
NNVGAATND		 PBM
Lambert et al.(2019)
pTH11367		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.661 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01276_2.00 Myb 20 71

DNA Binding Domains

Protein ID Domain From To Sequence
PK05732.1 Myb 20 71

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm014775 Prunus mume Pm014775 I 0.806
PRUPE_ppa023518mg Prunus persica PRUPE_ppa023518mg I 0.753
MDP0000244794 Malus domestica MDP0000244794 I 0.752
Solyc12g006280.1 Solanum lycopersicum Solyc12g006280.1 I 0.742
PGSC0003DMG400028830 Solanum tuberosum PGSC0003DMG400028830 I 0.742
SapurV1A.0354s0280 Salix purpurea SapurV1A.0354s0280 I 0.720
PGSC0003DMG400000922 Solanum tuberosum PGSC0003DMG400000922 I 0.718
Carubv10017538m.g Capsella rubella Carubv10017538m.g I 0.716
AT2G02060 Arabidopsis thaliana AT2G02060 I 0.716
Cagra.0549s0004 Capsella grandiflora Cagra.0549s0004 I 0.716
Bostr.0556s0031 Boechera stricta Bostr.0556s0031 I 0.716
fgenesh2_kg.5__121__AT2G02060.1 Arabidopsis lyrata fgenesh2_kg.5__121__AT2G02060.1 I 0.716
Eucgr.A02031 Eucalyptus grandis Eucgr.A02031 I 0.715
Cucsa.058770 Cucumis sativus Cucsa.058770 I 0.706
POPTR_0002s05770 Populus trichocarpa POPTR_0002s05770 I 0.705
TCM_001942 Theobroma cacao TCM_001942 I 0.699
Eucgr.D01346 Eucalyptus grandis Eucgr.D01346 I 0.698
Thhalv10020738m.g Eutrema salsugineum Thhalv10020738m.g I 0.693
PRUPE_ppa021540mg Prunus persica PRUPE_ppa021540mg I 0.679
GLYMA18G14071 Glycine max GLYMA18G14071 I 0.677
GLYMA08G41735 Glycine max GLYMA08G41735 I 0.669
TCM_026171 Theobroma cacao TCM_026171 I 0.668
VIT_12s0028g00980 Vitis vinifera VIT_12s0028g00980 I 0.668
Gorai.010G159700 Gossypium raimondii Gorai.010G159700 I 0.666
PDK_20s1498711g001 Phoenix dactylifera PDK_20s1498711g001 I 0.665
Thhalv10017090m.g Eutrema salsugineum Thhalv10017090m.g I 0.665
Lus10001149.g Linum usitatissimum Lus10001149.g I 0.665
SapurV1A.0429s0100 Salix purpurea SapurV1A.0429s0100 I 0.665
orange1.1g029903m.g Citrus sinensis orange1.1g029903m.g I 0.665
SapurV1A.3361s0010 Salix purpurea SapurV1A.3361s0010 I 0.665
29842.m003572 Ricinus communis 29842.m003572 I 0.665
POPTR_0004s01060 Populus trichocarpa POPTR_0004s01060 I 0.665
GLYMA15G11576 Glycine max GLYMA15G11576 I 0.665
GLYMA09G00685 Glycine max GLYMA09G00685 I 0.665
PRUPE_ppa015662mg Prunus persica PRUPE_ppa015662mg I 0.665
TCM_030248 Theobroma cacao TCM_030248 I 0.665
Ciclev10032941m.g Citrus clementina Ciclev10032941m.g I 0.665
cassava15362.m1 Manihot esculenta cassava15362.m1 I 0.665
Ca_00645 Cicer arietinum Ca_00645 I 0.665
Gorai.010G181100 Gossypium raimondii Gorai.010G181100 I 0.665