PRDM6 (Pteropus vampyrus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPVAG00000006781 T108588_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM6
M08277_2.00 		Homo sapiens
TTTTYYWBHHTTTYYHYTBYN
NRVARDRRAAADDVWRRAAAA		 ChIP-seq
Schmitges et al.(2016)
Q9NQX0.MEME 		0.827 1.000
PRDM6
M08855_2.00 		Homo sapiens
NNKTTTTCYYBYB
VRVRRGAAAAMNN		 Misc
Kulakovskiy et al.(2013)
PRDM6_HUMAN.H11MO.0.C 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000006399 C2H2 ZF 475 496
ENSPVAP00000006399 C2H2 ZF 503 525
ENSPVAP00000006399 C2H2 ZF 531 553
ENSPVAP00000006399 C2H2 ZF 559 580

Links

Other C2H2 ZF family TFs
Other Pteropus vampyrus TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.1085s0002 Capsella grandiflora Cagra.1085s0002 N 0.000
Carubv10001486m.g Capsella rubella Carubv10001486m.g N 0.000
Gorai.008G159000 Gossypium raimondii Gorai.008G159000 N 0.000
Gorai.009G337700 Gossypium raimondii Gorai.009G337700 N 0.000
mgf001568m Mimulus guttatus mgf001568m N 0.000
SELMODRAFT_77288 Selaginella moellendorffii SELMODRAFT_77288 N 0.000