Cagra.1085s0002 (Capsella grandiflora)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cagra.1085s0002 T049234_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1085s0002.1.p bHLH 158 206

Links

Other bHLH family TFs
Other Capsella grandiflora TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10001486m.g Capsella rubella Carubv10001486m.g N 0.914
BHLH61 Arabidopsis thaliana AT5G10570 N 0.888
BHLH93 Arabidopsis thaliana AT5G65640 N 0.888
BGIOSGA023624 Oryza indica BGIOSGA023624 N 0.888
Bo3g097890 Brassica oleracea Bo3g097890 N 0.888
Bo9g171940 Brassica oleracea Bo9g171940 N 0.888
Bra024404 Brassica rapa Bra024404 N 0.888
BRADI1G30000 Brachypodium distachyon BRADI1G30000 N 0.888
fgenesh2_kg.6__1024__AT5G10570.1 Arabidopsis lyrata fgenesh2_kg.6__1024__AT5G10570.1 N 0.888
bHLH093 Arabidopsis lyrata fgenesh2_kg.8__2611__AT5G65640.1 N 0.888
GLYMA01G02390 Glycine max GLYMA01G02390 N 0.888
GLYMA02G38240 Glycine max GLYMA02G38240 N 0.888
GLYMA04G09580 Glycine max GLYMA04G09580 N 0.888
GLYMA06G09670 Glycine max GLYMA06G09670 N 0.888
GLYMA08G37240 Glycine max GLYMA08G37240 N 0.888
GLYMA09G33590 Glycine max GLYMA09G33590 N 0.888
GLYMA14G36370 Glycine max GLYMA14G36370 N 0.888
GRMZM2G128807 Zea mays GRMZM2G128807 N 0.888
GSMUA_Achr1G26300_001 Musa acuminata GSMUA_Achr1G26300_001 N 0.888
GSMUA_Achr7G03930_001 Musa acuminata GSMUA_Achr7G03930_001 N 0.888
GSMUA_Achr8G34120_001 Musa acuminata GSMUA_Achr8G34120_001 N 0.888
LPERR06G23280 Leersia perrieri LPERR06G23280 N 0.888
MTR_3g111290 Medicago truncatula MTR_3g111290 N 0.888
MTR_5g030770 Medicago truncatula MTR_5g030770 N 0.888
OBART06G27800 Oryza barthii OBART06G27800 N 0.888
OBART06G27860 Oryza barthii OBART06G27860 N 0.888
OGLUM06G29220 Oryza glumaepatula OGLUM06G29220 N 0.888
OMERI06G27810 Oryza meridionalis OMERI06G27810 N 0.888
ONIVA06G30800 Oryza nivara ONIVA06G30800 N 0.888
OPUNC06G25390 Oryza punctata OPUNC06G25390 N 0.888
ORUFI06G29810 Oryza rufipogon ORUFI06G29810 N 0.888
PGSC0003DMG400006394 Solanum tuberosum PGSC0003DMG400006394 N 0.888
PGSC0003DMG400010388 Solanum tuberosum PGSC0003DMG400010388 N 0.888
PGSC0003DMG400030616 Solanum tuberosum PGSC0003DMG400030616 N 0.888
POPTR_0002s10910 Populus trichocarpa POPTR_0002s10910 N 0.888
PRUPE_ppa007656mg Prunus persica PRUPE_ppa007656mg N 0.888
PRUPE_ppa016514mg Prunus persica PRUPE_ppa016514mg N 0.888
Sb10g030470 Sorghum bicolor Sb10g030470 N 0.888
Si006877m.g Setaria italica Si006877m.g N 0.888
Solyc02g063430.2 Solanum lycopersicum Solyc02g063430.2 N 0.888
Solyc02g091690.2 Solanum lycopersicum Solyc02g091690.2 N 0.888
TCM_000915 Theobroma cacao TCM_000915 N 0.888
TCM_034574 Theobroma cacao TCM_034574 N 0.888
Traes_7DL_67FF12B6A Triticum aestivum Traes_7DL_67FF12B6A N 0.888
VIT_00s1312g00010 Vitis vinifera VIT_00s1312g00010 N 0.888
VIT_17s0000g03550 Vitis vinifera VIT_17s0000g03550 N 0.888
VIT_18s0001g08040 Vitis vinifera VIT_18s0001g08040 N 0.888
Ca_04981 Cicer arietinum Ca_04981 N 0.888
Ca_11531 Cicer arietinum Ca_11531 N 0.888
Cla022518 Citrullus lanatus Cla022518 N 0.888
Pm002283 Prunus mume Pm002283 N 0.888
Pm004330 Prunus mume Pm004330 N 0.888
28179.m000457 Ricinus communis 28179.m000457 N 0.888
29596.m000688 Ricinus communis 29596.m000688 N 0.888
cassava1707.valid.m1 Manihot esculenta cassava1707.valid.m1 N 0.888
cassava20174.m1 Manihot esculenta cassava20174.m1 N 0.888
cassava35909.valid.m1 Manihot esculenta cassava35909.valid.m1 N 0.888
cassava42105.valid.m1 Manihot esculenta cassava42105.valid.m1 N 0.888
Cucsa.103760 Cucumis sativus Cucsa.103760 N 0.888
Cucsa.160860 Cucumis sativus Cucsa.160860 N 0.888
mgf011848m Mimulus guttatus mgf011848m N 0.888
mgf017272m Mimulus guttatus mgf017272m N 0.888
Bostr.0568s0223 Boechera stricta Bostr.0568s0223 N 0.888
Bostr.13175s0042 Boechera stricta Bostr.13175s0042 N 0.888
Cagra.0917s0023 Capsella grandiflora Cagra.0917s0023 N 0.888
Carubv10026606m.g Capsella rubella Carubv10026606m.g N 0.888
Ciclev10001683m.g Citrus clementina Ciclev10001683m.g N 0.888
Ciclev10025967m.g Citrus clementina Ciclev10025967m.g N 0.888
Eucgr.F00459 Eucalyptus grandis Eucgr.F00459 N 0.888
Eucgr.F02171 Eucalyptus grandis Eucgr.F02171 N 0.888
Eucgr.I00608 Eucalyptus grandis Eucgr.I00608 N 0.888
gene05560-v1.0-hybrid Fragaria vesca gene05560-v1.0-hybrid N 0.888
gene26895-v1.0-hybrid Fragaria vesca gene26895-v1.0-hybrid N 0.888
Gorai.002G137900 Gossypium raimondii Gorai.002G137900 N 0.888
Gorai.003G035900 Gossypium raimondii Gorai.003G035900 N 0.888
Gorai.007G229900 Gossypium raimondii Gorai.007G229900 N 0.888
Gorai.009G226200 Gossypium raimondii Gorai.009G226200 N 0.888
Gorai.010G031800 Gossypium raimondii Gorai.010G031800 N 0.888
Lus10002160.g Linum usitatissimum Lus10002160.g N 0.888
Lus10039631.g Linum usitatissimum Lus10039631.g N 0.888
MDP0000175282 Malus domestica MDP0000175282 N 0.888
MDP0000178782 Malus domestica MDP0000178782 N 0.888
MDP0000312274 Malus domestica MDP0000312274 N 0.888
MDP0000603926 Malus domestica MDP0000603926 N 0.888
MDP0000644807 Malus domestica MDP0000644807 N 0.888
orange1.1g018897m.g Citrus sinensis orange1.1g018897m.g N 0.888
orange1.1g038389m.g Citrus sinensis orange1.1g038389m.g N 0.888
Pavir.J18000 Panicum virgatum Pavir.J18000 N 0.888
SapurV1A.0004s0900 Salix purpurea SapurV1A.0004s0900 N 0.888
Thhalv10004732m.g Eutrema salsugineum Thhalv10004732m.g N 0.888
PK12634.1 Cannabis sativa PK12634.1 N 0.888
chr2.CM0177.460.nc Lotus japonicus chr2.CM0177.460.nc N 0.888
chr2.CM0504.20.nd Lotus japonicus chr2.CM0504.20.nd N 0.888
LjSGA_043777.1 Lotus japonicus LjSGA_043777.1 N 0.888
PDK_20s1771821g001 Phoenix dactylifera PDK_20s1771821g001 N 0.888
GRMZM2G435015 Zea mays GRMZM2G435015 N 0.867
PGSC0003DMG400002056 Solanum tuberosum PGSC0003DMG400002056 N 0.867
Solyc12g088130.1 Solanum lycopersicum Solyc12g088130.1 N 0.867
BGIOSGA011499 Oryza indica BGIOSGA011499 N 0.864
GRMZM2G173372 Zea mays GRMZM2G173372 N 0.864
GSMUA_AchrUn_randomG16890_001 Musa acuminata GSMUA_AchrUn_randomG16890_001 N 0.864
LPERR03G02580 Leersia perrieri LPERR03G02580 N 0.864
MLOC_55768 Hordeum vulgare MLOC_55768 N 0.864
OB03G12820 Oryza brachyantha OB03G12820 N 0.864
OBART03G02840 Oryza barthii OBART03G02840 N 0.864
OGLUM03G02750 Oryza glumaepatula OGLUM03G02750 N 0.864
OLONG_005983 Oryza longistaminata OLONG_005983 N 0.864
OMERI03G02800 Oryza meridionalis OMERI03G02800 N 0.864
ONIVA03G02430 Oryza nivara ONIVA03G02430 N 0.864
OPUNC03G02570 Oryza punctata OPUNC03G02570 N 0.864
ORGLA03G0026100 Oryza glaberrima ORGLA03G0026100 N 0.864
ORUFI03G02540 Oryza rufipogon ORUFI03G02540 N 0.864
OS03G0135700 Oryza sativa OS03G0135700 N 0.864
Sb01g047940 Sorghum bicolor Sb01g047940 N 0.864
Si036470m.g Setaria italica Si036470m.g N 0.864
Traes_4DL_0075CCAD9 Triticum aestivum Traes_4DL_0075CCAD9 N 0.864
Traes_4DL_1C0F38900 Triticum aestivum Traes_4DL_1C0F38900 N 0.864
Traes_4DL_5851FBD0C Triticum aestivum Traes_4DL_5851FBD0C N 0.864
TRIUR3_23651 Triticum urartu TRIUR3_23651 N 0.864
TRIUR3_29035 Triticum urartu TRIUR3_29035 N 0.864
Cla014300 Citrullus lanatus Cla014300 N 0.864
Cla023435 Citrullus lanatus Cla023435 N 0.864
Cucsa.312190 Cucumis sativus Cucsa.312190 N 0.864
evm.TU.supercontig_129.19 Carica papaya evm.TU.supercontig_129.19 N 0.864
Pavir.Ia04450 Panicum virgatum Pavir.Ia04450 N 0.864
Pavir.Ib00206 Panicum virgatum Pavir.Ib00206 N 0.864
Pavir.J18595 Panicum virgatum Pavir.J18595 N 0.864
Pavir.J25463 Panicum virgatum Pavir.J25463 N 0.864
TCM_010375 Theobroma cacao TCM_010375 N 0.862
F775_00539 Aegilops tauschii F775_00539 N 0.861
Traes_4DL_ACF3BE9C5 Triticum aestivum Traes_4DL_ACF3BE9C5 N 0.861
Bo2g168250 Brassica oleracea Bo2g168250 N 0.858
Bra031852 Brassica rapa Bra031852 N 0.858
Aquca_010_00033 Aquilegia coerulea Aquca_010_00033 N 0.858
Traes_3AS_1FD49785C Triticum aestivum Traes_3AS_1FD49785C N 0.851
Gorai.009G337700 Gossypium raimondii Gorai.009G337700 N 0.848