CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb01g047940
(
Sorghum bicolor
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Sb01g047940
T044358_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb01g047940.1
bHLH
201
248
SKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELT
Links
Other
bHLH
family TFs
Other
Sorghum bicolor
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA011499
Oryza indica
BGIOSGA011499
N
0.914
GRMZM2G173372
Zea mays
GRMZM2G173372
N
0.914
LPERR03G02580
Leersia perrieri
LPERR03G02580
N
0.914
MLOC_55768
Hordeum vulgare
MLOC_55768
N
0.914
OB03G12820
Oryza brachyantha
OB03G12820
N
0.914
OBART03G02840
Oryza barthii
OBART03G02840
N
0.914
OGLUM03G02750
Oryza glumaepatula
OGLUM03G02750
N
0.914
OLONG_005983
Oryza longistaminata
OLONG_005983
N
0.914
OMERI03G02800
Oryza meridionalis
OMERI03G02800
N
0.914
ONIVA03G02430
Oryza nivara
ONIVA03G02430
N
0.914
OPUNC03G02570
Oryza punctata
OPUNC03G02570
N
0.914
ORGLA03G0026100
Oryza glaberrima
ORGLA03G0026100
N
0.914
ORUFI03G02540
Oryza rufipogon
ORUFI03G02540
N
0.914
OS03G0135700
Oryza sativa
OS03G0135700
N
0.914
Si036470m.g
Setaria italica
Si036470m.g
N
0.914
Traes_4DL_0075CCAD9
Triticum aestivum
Traes_4DL_0075CCAD9
N
0.914
Traes_4DL_1C0F38900
Triticum aestivum
Traes_4DL_1C0F38900
N
0.914
Traes_4DL_5851FBD0C
Triticum aestivum
Traes_4DL_5851FBD0C
N
0.914
TRIUR3_29035
Triticum urartu
TRIUR3_29035
N
0.914
Pavir.Ia04450
Panicum virgatum
Pavir.Ia04450
N
0.914
Pavir.Ib00206
Panicum virgatum
Pavir.Ib00206
N
0.914
Pavir.J25463
Panicum virgatum
Pavir.J25463
N
0.914
F775_00539
Aegilops tauschii
F775_00539
N
0.912
Traes_4DL_ACF3BE9C5
Triticum aestivum
Traes_4DL_ACF3BE9C5
N
0.912
BHLH61
Arabidopsis thaliana
AT5G10570
N
0.890
BHLH93
Arabidopsis thaliana
AT5G65640
N
0.890
BGIOSGA023624
Oryza indica
BGIOSGA023624
N
0.890
Bo3g097890
Brassica oleracea
Bo3g097890
N
0.890
Bo9g171940
Brassica oleracea
Bo9g171940
N
0.890
Bra024404
Brassica rapa
Bra024404
N
0.890
BRADI1G30000
Brachypodium distachyon
BRADI1G30000
N
0.890
fgenesh2_kg.6__1024__AT5G10570.1
Arabidopsis lyrata
fgenesh2_kg.6__1024__AT5G10570.1
N
0.890
bHLH093
Arabidopsis lyrata
fgenesh2_kg.8__2611__AT5G65640.1
N
0.890
GLYMA01G02390
Glycine max
GLYMA01G02390
N
0.890
GLYMA04G09580
Glycine max
GLYMA04G09580
N
0.890
GLYMA06G09670
Glycine max
GLYMA06G09670
N
0.890
GLYMA08G37240
Glycine max
GLYMA08G37240
N
0.890
GLYMA09G33590
Glycine max
GLYMA09G33590
N
0.890
GRMZM2G128807
Zea mays
GRMZM2G128807
N
0.890
GSMUA_Achr1G26300_001
Musa acuminata
GSMUA_Achr1G26300_001
N
0.890
GSMUA_Achr7G03930_001
Musa acuminata
GSMUA_Achr7G03930_001
N
0.890
GSMUA_Achr8G34120_001
Musa acuminata
GSMUA_Achr8G34120_001
N
0.890
GSMUA_AchrUn_randomG16890_001
Musa acuminata
GSMUA_AchrUn_randomG16890_001
N
0.890
LPERR06G23280
Leersia perrieri
LPERR06G23280
N
0.890
MTR_5g030770
Medicago truncatula
MTR_5g030770
N
0.890
OBART06G27800
Oryza barthii
OBART06G27800
N
0.890
OBART06G27860
Oryza barthii
OBART06G27860
N
0.890
OGLUM06G29220
Oryza glumaepatula
OGLUM06G29220
N
0.890
OMERI06G27810
Oryza meridionalis
OMERI06G27810
N
0.890
ONIVA06G30800
Oryza nivara
ONIVA06G30800
N
0.890
OPUNC06G25390
Oryza punctata
OPUNC06G25390
N
0.890
ORUFI06G29810
Oryza rufipogon
ORUFI06G29810
N
0.890
PGSC0003DMG400006394
Solanum tuberosum
PGSC0003DMG400006394
N
0.890
PGSC0003DMG400010388
Solanum tuberosum
PGSC0003DMG400010388
N
0.890
PGSC0003DMG400030616
Solanum tuberosum
PGSC0003DMG400030616
N
0.890
POPTR_0002s10910
Populus trichocarpa
POPTR_0002s10910
N
0.890
PRUPE_ppa007656mg
Prunus persica
PRUPE_ppa007656mg
N
0.890
PRUPE_ppa016514mg
Prunus persica
PRUPE_ppa016514mg
N
0.890
Sb10g030470
Sorghum bicolor
Sb10g030470
N
0.890
Si006877m.g
Setaria italica
Si006877m.g
N
0.890
Solyc02g063430.2
Solanum lycopersicum
Solyc02g063430.2
N
0.890
Solyc02g091690.2
Solanum lycopersicum
Solyc02g091690.2
N
0.890
TCM_000915
Theobroma cacao
TCM_000915
N
0.890
TCM_034574
Theobroma cacao
TCM_034574
N
0.890
Traes_7DL_67FF12B6A
Triticum aestivum
Traes_7DL_67FF12B6A
N
0.890
VIT_00s1312g00010
Vitis vinifera
VIT_00s1312g00010
N
0.890
VIT_17s0000g03550
Vitis vinifera
VIT_17s0000g03550
N
0.890
VIT_18s0001g08040
Vitis vinifera
VIT_18s0001g08040
N
0.890
Ca_11531
Cicer arietinum
Ca_11531
N
0.890
Cla014300
Citrullus lanatus
Cla014300
N
0.890
Pm002283
Prunus mume
Pm002283
N
0.890
Pm004330
Prunus mume
Pm004330
N
0.890
28179.m000457
Ricinus communis
28179.m000457
N
0.890
29596.m000688
Ricinus communis
29596.m000688
N
0.890
cassava1707.valid.m1
Manihot esculenta
cassava1707.valid.m1
N
0.890
cassava20174.m1
Manihot esculenta
cassava20174.m1
N
0.890
cassava35909.valid.m1
Manihot esculenta
cassava35909.valid.m1
N
0.890
cassava42105.valid.m1
Manihot esculenta
cassava42105.valid.m1
N
0.890
Cucsa.103760
Cucumis sativus
Cucsa.103760
N
0.890
mgf011848m
Mimulus guttatus
mgf011848m
N
0.890
mgf017272m
Mimulus guttatus
mgf017272m
N
0.890
Bostr.0568s0223
Boechera stricta
Bostr.0568s0223
N
0.890
Bostr.13175s0042
Boechera stricta
Bostr.13175s0042
N
0.890
Cagra.0917s0023
Capsella grandiflora
Cagra.0917s0023
N
0.890
Carubv10026606m.g
Capsella rubella
Carubv10026606m.g
N
0.890
Ciclev10001683m.g
Citrus clementina
Ciclev10001683m.g
N
0.890
Ciclev10025967m.g
Citrus clementina
Ciclev10025967m.g
N
0.890
Eucgr.F00459
Eucalyptus grandis
Eucgr.F00459
N
0.890
Eucgr.F02171
Eucalyptus grandis
Eucgr.F02171
N
0.890
Eucgr.I00608
Eucalyptus grandis
Eucgr.I00608
N
0.890
evm.TU.supercontig_129.19
Carica papaya
evm.TU.supercontig_129.19
N
0.890
gene05560-v1.0-hybrid
Fragaria vesca
gene05560-v1.0-hybrid
N
0.890
gene26895-v1.0-hybrid
Fragaria vesca
gene26895-v1.0-hybrid
N
0.890
Gorai.002G137900
Gossypium raimondii
Gorai.002G137900
N
0.890
Gorai.003G035900
Gossypium raimondii
Gorai.003G035900
N
0.890
Gorai.007G229900
Gossypium raimondii
Gorai.007G229900
N
0.890
Gorai.009G226200
Gossypium raimondii
Gorai.009G226200
N
0.890
Gorai.010G031800
Gossypium raimondii
Gorai.010G031800
N
0.890
Lus10002160.g
Linum usitatissimum
Lus10002160.g
N
0.890
Lus10039631.g
Linum usitatissimum
Lus10039631.g
N
0.890
MDP0000175282
Malus domestica
MDP0000175282
N
0.890
MDP0000178782
Malus domestica
MDP0000178782
N
0.890
MDP0000312274
Malus domestica
MDP0000312274
N
0.890
MDP0000603926
Malus domestica
MDP0000603926
N
0.890
MDP0000644807
Malus domestica
MDP0000644807
N
0.890
orange1.1g018897m.g
Citrus sinensis
orange1.1g018897m.g
N
0.890
orange1.1g038389m.g
Citrus sinensis
orange1.1g038389m.g
N
0.890
Pavir.J18000
Panicum virgatum
Pavir.J18000
N
0.890
Pavir.J18595
Panicum virgatum
Pavir.J18595
N
0.890
SapurV1A.0004s0900
Salix purpurea
SapurV1A.0004s0900
N
0.890
Thhalv10004732m.g
Eutrema salsugineum
Thhalv10004732m.g
N
0.890
PK12634.1
Cannabis sativa
PK12634.1
N
0.890
chr2.CM0177.460.nc
Lotus japonicus
chr2.CM0177.460.nc
N
0.890
LjSGA_043777.1
Lotus japonicus
LjSGA_043777.1
N
0.890
PDK_20s1771821g001
Phoenix dactylifera
PDK_20s1771821g001
N
0.890
TRIUR3_23651
Triticum urartu
TRIUR3_23651
N
0.888
BRADI1G76030
Brachypodium distachyon
BRADI1G76030
N
0.884
Traes_3AS_1FD49785C
Triticum aestivum
Traes_3AS_1FD49785C
N
0.875
GRMZM2G435015
Zea mays
GRMZM2G435015
N
0.870
PGSC0003DMG400002056
Solanum tuberosum
PGSC0003DMG400002056
N
0.870
Solyc12g088130.1
Solanum lycopersicum
Solyc12g088130.1
N
0.870
GLYMA02G38240
Glycine max
GLYMA02G38240
N
0.864
GLYMA14G36370
Glycine max
GLYMA14G36370
N
0.864
MTR_3g111290
Medicago truncatula
MTR_3g111290
N
0.864
Ca_04981
Cicer arietinum
Ca_04981
N
0.864
Cla022518
Citrullus lanatus
Cla022518
N
0.864
Cla023435
Citrullus lanatus
Cla023435
N
0.864
Cucsa.160860
Cucumis sativus
Cucsa.160860
N
0.864
Cucsa.312190
Cucumis sativus
Cucsa.312190
N
0.864
Cagra.1085s0002
Capsella grandiflora
Cagra.1085s0002
N
0.864
Carubv10001486m.g
Capsella rubella
Carubv10001486m.g
N
0.864
chr2.CM0504.20.nd
Lotus japonicus
chr2.CM0504.20.nd
N
0.864
BGIOSGA031474
Oryza indica
BGIOSGA031474
N
0.860
Bo2g168250
Brassica oleracea
Bo2g168250
N
0.860
Bra031852
Brassica rapa
Bra031852
N
0.860
OBART10G17440
Oryza barthii
OBART10G17440
N
0.860
OGLUM10G17470
Oryza glumaepatula
OGLUM10G17470
N
0.860
OMERI10G13920
Oryza meridionalis
OMERI10G13920
N
0.860
ONIVA10G19680
Oryza nivara
ONIVA10G19680
N
0.860
OPUNC10G15730
Oryza punctata
OPUNC10G15730
N
0.860
ORGLA10G0124500
Oryza glaberrima
ORGLA10G0124500
N
0.860
ORUFI10G18500
Oryza rufipogon
ORUFI10G18500
N
0.860
OS10G0544200
Oryza sativa
OS10G0544200
N
0.860
Aquca_010_00033
Aquilegia coerulea
Aquca_010_00033
N
0.860
evm.TU.supercontig_177.1
Carica papaya
evm.TU.supercontig_177.1
N
0.860
SELMODRAFT_77288
Selaginella moellendorffii
SELMODRAFT_77288
N
0.855
Traes_4BL_0F2281616
Triticum aestivum
Traes_4BL_0F2281616
N
0.847