CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Patz1
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000018709
T109059_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000025378
C2H2 ZF
292
314
LPCGLCGKVFTDANRLRQHEAQH
ENSRNOP00000025378
C2H2 ZF
356
377
ACEICGKIFRDVYHLNRHKLSH
ENSRNOP00000025378
C2H2 ZF
383
405
YSCPVCGLRFKRKDRMSYHVRSH
ENSRNOP00000025378
C2H2 ZF
413
436
YICQSCGKGFSRPDHLNGHIKQVH
ENSRNOP00000025378
C2H2 ZF
442
464
HKCQTCNASFATRDRLRSHLACH
ENSRNOP00000072370
C2H2 ZF
292
314
LPCGLCGKVFTDANRLRQHEAQH
ENSRNOP00000072370
C2H2 ZF
356
377
ACEICGKIFRDVYHLNRHKLSH
ENSRNOP00000072370
C2H2 ZF
383
405
YSCPVCGLRFKRKDRMSYHVRSH
ENSRNOP00000072370
C2H2 ZF
413
436
YICQSCGKGFSRPDHLNGHIKQVH
ENSRNOP00000072870
C2H2 ZF
292
314
LPCGLCGKVFTDANRLRQHEAQH
ENSRNOP00000072870
C2H2 ZF
356
377
ACEICGKIFRDVYHLNRHKLSH
ENSRNOP00000072870
C2H2 ZF
383
405
YSCPVCGLRFKRKDRMSYHVRSH
ENSRNOP00000072870
C2H2 ZF
413
436
YICQSCGKGFSRPDHLNGHIKQVH
ENSRNOP00000072870
C2H2 ZF
442
464
HKCQTCNASFATRDRLRSHLACH
ENSRNOP00000073870
C2H2 ZF
292
314
LPCGLCGKVFTDANRLRQHEAQH
ENSRNOP00000073870
C2H2 ZF
356
377
ACEICGKIFRDVYHLNRHKLSH
ENSRNOP00000073870
C2H2 ZF
383
405
YSCPVCGLRFKRKDRMSYHVRSH
ENSRNOP00000073870
C2H2 ZF
413
436
YICQSCGKGFSRPDHLNGHIKQVH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CAD26294
Encephalitozoon cuniculi
CAD26294
N
EDEG_01335
Edhazardia aedis
EDEG_01335
N
EHEL_031450
Encephalitozoon hellem
EHEL_031450
N
Eint_031430
Encephalitozoon intestinalis
Eint_031430
N
H311_02791
Anncaliia algerae
H311_02791
N
M896_030210
Ordospora colligata
M896_030210
N
NAPIS_ORF00473
Nosema apis
NAPIS_ORF00473
N
NBO_508g0015
Nosema bombycis
NBO_508g0015
N
NCER_100140
Nosema ceranae
NCER_100140
N
THOM_0741
Trachipleistophora hominis
THOM_0741
N
VCUG_02216
Vavraia culicis
VCUG_02216
N