Patz1 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000018709 T109059_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable several functions, including DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and ubiquitin protein ligase binding activity. Predicted to be involved in negative regulation of endothelial cell migration and positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including T cell differentiation; male gonad development; and spermatogenesis. Predicted to be located in nucleus. Predicted to be active in nucleoplasm. Orthologous to human PATZ1 (POZ/BTB and AT hook containing zinc finger 1). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000025378 C2H2 ZF 292 314
ENSRNOP00000025378 C2H2 ZF 356 377
ENSRNOP00000025378 C2H2 ZF 383 405
ENSRNOP00000025378 C2H2 ZF 413 436
ENSRNOP00000025378 C2H2 ZF 442 464
ENSRNOP00000072370 C2H2 ZF 292 314
ENSRNOP00000072370 C2H2 ZF 356 377
ENSRNOP00000072370 C2H2 ZF 383 405
ENSRNOP00000072370 C2H2 ZF 413 436
ENSRNOP00000072870 C2H2 ZF 292 314
ENSRNOP00000072870 C2H2 ZF 356 377
ENSRNOP00000072870 C2H2 ZF 383 405
ENSRNOP00000072870 C2H2 ZF 413 436
ENSRNOP00000072870 C2H2 ZF 442 464
ENSRNOP00000073870 C2H2 ZF 292 314
ENSRNOP00000073870 C2H2 ZF 356 377
ENSRNOP00000073870 C2H2 ZF 383 405
ENSRNOP00000073870 C2H2 ZF 413 436

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPSIG00000011562 Pelodiscus sinensis ENSPSIG00000011562 I 0.827
ENSPPYG00000011732 Pongo abelii ENSPPYG00000011732 I 0.827
PATZ1 Canis familiaris ENSCAFG00000013087 I 0.827
PATZ1 Sus scrofa ENSSSCG00000010027 N 0.827
Cmyd_10005165 Chelonia mydas Cmyd_10005165 N 0.827
Alligator_sinensis_CCG014139.1 Alligator sinensis Alligator_sinensis_CCG014139.1 N 0.827
PATZ1 Taeniopygia guttata ENSTGUG00000009749 N 0.827
Ogr03452 Ophisaurus gracilis Ogr03452 N 0.827
Patz1 Mus musculus ENSMUSG00000020453 I 0.827
PATZ1 Felis catus ENSFCAG00000030253 N 0.827
PATZ1 Equus caballus ENSECAG00000025030 N 0.827
ENSCSAG00000008746 Chlorocebus sabaeus ENSCSAG00000008746 N 0.827
PATZ1 Callithrix jacchus ENSCJAG00000010978 N 0.827
PATZ1 Homo sapiens ENSG00000100105 D 0.827
PATZ1 Myotis lucifugus ENSMLUG00000009942 I 0.827
ENSMPUG00000012814 Mustela putorius furo ENSMPUG00000012814 N 0.827
PATZ1 Macaca mulatta ENSMMUG00000013911 I 0.827
PATZ1 Oryctolagus cuniculus ENSOCUG00000002323 N 0.825
PATZ1 Ochotona princeps ENSOPRG00000002286 N 0.825
ENSOARG00000010061 Ovis aries ENSOARG00000010061 N 0.818