Alligator_sinensis_CCG014139.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG014139.1 T133315_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG014139.1 C2H2 ZF 181 203
Alligator_sinensis_CCG014139.1 C2H2 ZF 245 266
Alligator_sinensis_CCG014139.1 C2H2 ZF 272 294
Alligator_sinensis_CCG014139.1 C2H2 ZF 302 325
Alligator_sinensis_CCG014139.1 C2H2 ZF 331 353

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PATZ1 Canis familiaris ENSCAFG00000013087 I 0.827
ENSCSAG00000008746 Chlorocebus sabaeus ENSCSAG00000008746 N 0.827
PATZ1 Equus caballus ENSECAG00000025030 N 0.827
PATZ1 Felis catus ENSFCAG00000030253 N 0.827
PATZ1 Homo sapiens ENSG00000100105 D 0.827
PATZ1 Myotis lucifugus ENSMLUG00000009942 I 0.827
PATZ1 Macaca mulatta ENSMMUG00000013911 I 0.827
ENSMPUG00000012814 Mustela putorius furo ENSMPUG00000012814 N 0.827
Patz1 Mus musculus ENSMUSG00000020453 I 0.827
ENSPSIG00000011562 Pelodiscus sinensis ENSPSIG00000011562 I 0.827
Patz1 Rattus norvegicus ENSRNOG00000018709 N 0.827
PATZ1 Sus scrofa ENSSSCG00000010027 N 0.827
PATZ1 Taeniopygia guttata ENSTGUG00000009749 N 0.827
Cmyd_10005165 Chelonia mydas Cmyd_10005165 N 0.827
Ogr03452 Ophisaurus gracilis Ogr03452 N 0.827
PATZ1 Oryctolagus cuniculus ENSOCUG00000002323 N 0.825
PATZ1 Ochotona princeps ENSOPRG00000002286 N 0.825
ENSOARG00000010061 Ovis aries ENSOARG00000010061 N 0.818