CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSSCG00000021196
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000021196
T110438_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HIC2
M02902_2.00
Homo sapiens
RTGCCMVNN
NNBKGGCAY
SELEX
Jolma et al.(2013)
HIC2_1
0.827
1.000
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN
NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.795
0.852
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC
GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.795
0.852
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN
NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.795
0.852
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH
DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.795
0.852
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000020778
C2H2 ZF
440
462
YVCIPCAKGFPSSEQLNAHVETH
ENSSSCP00000020778
C2H2 ZF
495
517
FKCSVCEKTYKDPATLRQHEKTH
ENSSSCP00000020778
C2H2 ZF
523
545
FPCNICGKMFTQRGTMTRHMRSH
ENSSSCP00000020778
C2H2 ZF
551
573
FACDECGMRFTRQYRLTEHMRVH
ENSSSCP00000020778
C2H2 ZF
579
601
YECQLCGGKFTQQRNLISHLRMH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000012733
Ailuropoda melanoleuca
ENSAMEG00000012733
I
ZNF335
Bos taurus
ENSBTAG00000010130
I
ENSBTAP00000053387-D1
Bos grunniens
ENSBTAP00000053387-D1
I
ZNF335
Canis familiaris
ENSCAFG00000009882
I
ZNF335
Callithrix jacchus
ENSCJAG00000017215
I
ZNF335
Cavia porcellus
ENSCPOG00000000138
I
ENSCSAG00000014693
Chlorocebus sabaeus
ENSCSAG00000014693
I
Zfp335
Dipodomys ordii
ENSDORG00000007083
I
ZNF335
Equus caballus
ENSECAG00000023647
I
ZNF335
Homo sapiens
ENSG00000198026
D
ZNF335
Gorilla gorilla
ENSGGOG00000013550
I
ZNF335
Loxodonta africana
ENSLAFG00000016142
I
ZNF335
Myotis lucifugus
ENSMLUG00000000282
I
ENSMPUG00000017610
Mustela putorius furo
ENSMPUG00000017610
I
Zfp335
Mus musculus
ENSMUSG00000039834
D
ZNF335
Oryctolagus cuniculus
ENSOCUG00000016059
I
ENSPPYG00000011082
Pongo abelii
ENSPPYG00000011082
I
ZNF335
Pan troglodytes
ENSPTRG00000023353
I
ZNF335
Pteropus vampyrus
ENSPVAG00000000383
I
Zfp335
Rattus norvegicus
ENSRNOG00000017290
I
ENSSTOG00000006323
Ictidomys tridecemlineatus
ENSSTOG00000006323
I
ZNF335
Tursiops truncatus
ENSTTRG00000012103
I
Myotis_brandtii_ZNF335_10013703
Myotis brandtii
Myotis_brandtii_ZNF335_10013703
I