ENSSSCG00000022610 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000022610 T110479_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF317
M08308_2.00 		Homo sapiens
HWGTCWKCTGTY
RACAGMWGACWD		 ChIP-seq
Schmitges et al.(2016)
Q96PQ6_4-7.RCADE 		0.783 0.963
ZNF317
M07584_2.00 		Homo sapiens
RAGAARTCWGCTGTYADTCTWAYY
RRTWAGAHTRACAGCWGAYTTCTY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF317.RCADE.OriginalMapping 		0.783 0.963
ZNF317
M08242_2.00 		Homo sapiens
CYATTGTTH
DAACAATRG		 ChIP-seq
Najafabadi et al.(2015b)
ZNF317 		0.783 0.963
ZNF317
M08890_2.00 		Homo sapiens
TRARAARTCWGCTGTYWDTC
GAHWRACAGCWGAYTTYTYA		 Misc
Kulakovskiy et al.(2013)
ZN317_HUMAN.H11MO.0.C 		0.783 0.963
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000019665 C2H2 ZF 226 248
ENSSSCP00000019665 C2H2 ZF 254 276
ENSSSCP00000019665 C2H2 ZF 282 304
ENSSSCP00000019665 C2H2 ZF 310 332
ENSSSCP00000019665 C2H2 ZF 338 360
ENSSSCP00000019665 C2H2 ZF 366 388
ENSSSCP00000019665 C2H2 ZF 394 416
ENSSSCP00000019665 C2H2 ZF 422 444
ENSSSCP00000019665 C2H2 ZF 450 472
ENSSSCP00000019665 C2H2 ZF 478 500
ENSSSCP00000019665 C2H2 ZF 506 528
ENSSSCP00000019665 C2H2 ZF 534 556
ENSSSCP00000019665 C2H2 ZF 562 584

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_10178 Aegilops tauschii F775_10178 N
MLOC_51817 Hordeum vulgare MLOC_51817 N
OBART02G37310 Oryza barthii OBART02G37310 N
OGLUM02G38450 Oryza glumaepatula OGLUM02G38450 N
OLONG_013731 Oryza longistaminata OLONG_013731 N
OMERI02G35090 Oryza meridionalis OMERI02G35090 N
ONIVA02G40070 Oryza nivara ONIVA02G40070 N
OPUNC02G34470 Oryza punctata OPUNC02G34470 N
ORGLA02G0325300 Oryza glaberrima ORGLA02G0325300 N
ORUFI02G38810 Oryza rufipogon ORUFI02G38810 N
OS02G0817000 Oryza sativa OS02G0817000 N
Pavir.Ab03236 Panicum virgatum Pavir.Ab03236 N
Traes_6AL_6E9EB1143 Triticum aestivum Traes_6AL_6E9EB1143 N
Traes_6BL_70715AAF9 Triticum aestivum Traes_6BL_70715AAF9 N
Traes_6DL_917D35DED Triticum aestivum Traes_6DL_917D35DED N
TRIUR3_25071 Triticum urartu TRIUR3_25071 N