Pavir.Ab03236 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ab03236 T289003_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ab03236.3.p Myb 552 602
Pavir.Ab03236.4.p Myb 552 602
Pavir.Ab03236.5.p Myb 552 602
Pavir.Ab03236.6.p Myb 552 602

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA009295 Oryza indica BGIOSGA009295 N 0.778
OBART02G37310 Oryza barthii OBART02G37310 N 0.778
OGLUM02G38450 Oryza glumaepatula OGLUM02G38450 N 0.778
OLONG_013731 Oryza longistaminata OLONG_013731 N 0.778
OMERI02G35090 Oryza meridionalis OMERI02G35090 N 0.778
ONIVA02G40070 Oryza nivara ONIVA02G40070 N 0.778
OPUNC02G34470 Oryza punctata OPUNC02G34470 N 0.778
ORGLA02G0325300 Oryza glaberrima ORGLA02G0325300 N 0.778
ORUFI02G38810 Oryza rufipogon ORUFI02G38810 N 0.778
OS02G0817000 Oryza sativa OS02G0817000 N 0.778
Traes_6AL_6E9EB1143 Triticum aestivum Traes_6AL_6E9EB1143 N 0.742
TRIUR3_25071 Triticum urartu TRIUR3_25071 N 0.742
F775_10178 Aegilops tauschii F775_10178 N 0.724
Traes_6DL_917D35DED Triticum aestivum Traes_6DL_917D35DED N 0.724
Traes_6BL_70715AAF9 Triticum aestivum Traes_6BL_70715AAF9 N 0.715
MLOC_51817 Hordeum vulgare MLOC_51817 N 0.709
PDK_20s1361511g002 Phoenix dactylifera PDK_20s1361511g002 N 0.704