CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TSHZ3
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000025214
T110526_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000019553
C2H2 ZF
215
239
FRCKDCSAAYDTLVELTVHMNETGH
ENSSSCP00000019553
C2H2 ZF
276
300
LKCMYCGHSFESLQDLSVHMIKTKH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
189 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI4G04720
Brachypodium distachyon
BRADI4G04720
I
F775_30589
Aegilops tauschii
F775_30589
I
GRMZM2G160902
Zea mays
GRMZM2G160902
I
GRMZM2G479885
Zea mays
GRMZM2G479885
D
LPERR12G12950
Leersia perrieri
LPERR12G12950
I
MLOC_51930
Hordeum vulgare
MLOC_51930
I
OBART12G15770
Oryza barthii
OBART12G15770
I
OGLUM12G17310
Oryza glumaepatula
OGLUM12G17310
I
OMERI02G09390
Oryza meridionalis
OMERI02G09390
I
ONIVA12G14510
Oryza nivara
ONIVA12G14510
I
OPUNC12G14150
Oryza punctata
OPUNC12G14150
I
ORGLA11G0215100
Oryza glaberrima
ORGLA11G0215100
I
ORGLA12G0138000
Oryza glaberrima
ORGLA12G0138000
I
ORUFI12G17520
Oryza rufipogon
ORUFI12G17520
I
Pavir.Ca02565
Panicum virgatum
Pavir.Ca02565
I
Pavir.Cb00560
Panicum virgatum
Pavir.Cb00560
I
Sb08g018170
Sorghum bicolor
Sb08g018170
I
Si023541m.g
Setaria italica
Si023541m.g
I
Traes_5BS_FF44610EF1
Triticum aestivum
Traes_5BS_FF44610EF1
I
Traes_5DS_011851EE7
Triticum aestivum
Traes_5DS_011851EE7
I